RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 PTGIRP43119 386 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 ALDH1A3P47895 512 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 KCNJ1P48048 391 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 USP46P62068 366 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 OTUD4Q01804 1114 aaKnown RBP12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 CUL1Q13616 776 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 RAB33AQ14088 237 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 HLTFQ14527 1009 aaKnown RBP eCLIP12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 TAF12Q16514 161 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 ANKRD20A8PQ5CZ79 823 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 BRMS1LQ5PSV4 323 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 MSANTD2Q6P1R3 559 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 DRICH1Q6PGQ1 229 aaPredicted RBP12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 CCNI2Q6ZMN8 369 aaPredicted RBP12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 GSTA5Q7RTV2 222 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 SCD5Q86SK9 330 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 KLHL23Q8NBE8 558 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 PDZD8Q8NEN9 1154 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 GPR152Q8TDT2 470 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 HNRNPLLQ8WVV9 542 aaKnown RBP12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 CASKIN2Q8WXE0 1202 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 IFT81Q8WYA0 676 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 SLCO2A1Q92959 643 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 CDX2Q99626 313 aaPredicted RBP12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 DPH5Q9H2P9 285 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 WDCPQ9H6R7 721 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 PRDM16Q9HAZ2 1276 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 NMUR1Q9HB89 426 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 CALCOCO1Q9P1Z2 691 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 FBXW11Q9UKB1 542 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 MAFFQ9ULX9 164 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 MAGED2Q9UNF1 606 aaPredicted RBP12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 YIPF1Q9Y548 306 aa12.06□□□□□ -0.48
SNRNP35-202ENST00000412157 ZSCAN5CA6NGD5 496 aaPredicted RBP12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 PRRG1O14668 218 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 LPXNO60711 386 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 ABLIM3O94929 683 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 RARGP13631 454 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 FOSL2P15408 326 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 ATF6P18850 670 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 ADRA1BP35368 520 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 CXCR3P49682 368 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 ZNF135P52742 658 aaPredicted RBP12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 VCPP55072 806 aaKnown RBP12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 ADCY2Q08462 1091 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 SCAPQ12770 1279 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 TAF10Q12962 218 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 PLD1Q13393 1074 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 BYSLQ13895 437 aaKnown RBP12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 SHHQ15465 462 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 TMC7Q7Z402 723 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 EIF1ADQ8N9N8 165 aaKnown RBP12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 ACTL9Q8TC94 416 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 CCHCR1Q8TD31 782 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 AUTS2Q8WXX7 1259 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 MYLIPQ8WY64 445 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 OVCA2Q8WZ82 227 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 P3H4Q92791 437 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 NKD2Q969F2 451 aaPredicted RBP12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 FAF2Q96CS3 445 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 CDK5RAP1Q96SZ6 601 aaKnown RBP12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 EPAS1Q99814 870 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 FAM118BQ9BPY3 351 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 HINFPQ9BQA5 517 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 ERP44Q9BS26 406 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 TTLL2Q9BWV7 592 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 TRIM31Q9BZY9 425 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 RXFP1Q9HBX9 757 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 WDR6Q9NNW5 1121 aaKnown RBP12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 CLIC5Q9NZA1 410 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 ASIC3Q9UHC3 531 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 ZNF148Q9UQR1 794 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 LZTS1Q9Y250 596 aa12.05□□□□□ -0.48
SNRNP35-202ENST00000412157 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 ESYT3A0FGR9 886 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 EEF2KO00418 725 aaKnown RBP12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 DAPK3O43293 454 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 CREB3O43889 395 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 SEC24AO95486 1093 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 IGLV3-25P01717 112 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 ADH1AP07327 375 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 LINC00271P0C7V0 271 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 CCR1P32246 355 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 BMPR1AP36894 532 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 TNNT3P45378 269 aaPredicted RBP12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 TPI1P60174 286 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 EIF3EP60228 445 aaKnown RBP12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 RBM10P98175 930 aaKnown RBP12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 MTMR3Q13615 1198 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 PTK6Q13882 451 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 NOMO1Q15155 1222 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 C9orf50Q5SZB4 431 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 SLC9A4Q6AI14 798 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 C1orf228Q6PIY5 440 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 TADA2BQ86TJ2 420 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 GSPT2Q8IYD1 628 aaKnown RBP12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 PYROXD2Q8N2H3 581 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 PCDH19Q8TAB3 1148 aa12.04□□□□□ -0.48
SNRNP35-202ENST00000412157 CASP10Q92851 521 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms