RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 TIPINQ9BVW5 301 aa7.33□□□□□ -1.24
LSM8-202ENST00000411938 TTLL2Q9BWV7 592 aa7.33□□□□□ -1.24
LSM8-202ENST00000411938 BBS2Q9BXC9 721 aa7.33□□□□□ -1.24
LSM8-202ENST00000411938 XPO4Q9C0E2 1151 aaKnown RBP7.33□□□□□ -1.24
LSM8-202ENST00000411938 PCED1AQ9H1Q7 454 aa7.33□□□□□ -1.24
LSM8-202ENST00000411938 C6orf106Q9H6K1 298 aaPredicted RBP7.33□□□□□ -1.24
LSM8-202ENST00000411938 MAGEC2Q9UBF1 373 aaPredicted RBP7.33□□□□□ -1.24
LSM8-202ENST00000411938 CLCA2Q9UQC9 943 aa7.33□□□□□ -1.24
LSM8-202ENST00000411938 C2CD2Q9Y426 696 aa7.33□□□□□ -1.24
LSM8-202ENST00000411938 TMEM131Q92545 1883 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 A0A1B0GTQ1 180 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 USP27XA6NNY8 438 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 TERTO14746 1132 aaKnown RBP7.32□□□□□ -1.24
LSM8-202ENST00000411938 PAPSS1O43252 624 aaPredicted RBP7.32□□□□□ -1.24
LSM8-202ENST00000411938 CCP110O43303 1012 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 COCHO43405 550 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 CACNG3O60359 315 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 ATP2C2O75185 946 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 FSBPO95073 299 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 IGLV3-19P01714 112 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 MPOP05164 745 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 IRF1P10914 325 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 TYRP14679 529 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 GUCY2CP25092 1073 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 CDC25AP30304 524 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 POLR2BP30876 1174 aaKnown RBP7.32□□□□□ -1.24
LSM8-202ENST00000411938 CTSKP43235 329 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 LHX1P48742 406 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 DGKGP49619 791 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 PSMC1P62191 440 aaKnown RBP7.32□□□□□ -1.24
LSM8-202ENST00000411938 MYL5Q02045 173 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 CYP27A1Q02318 531 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 IFRD2Q12894 506 aaPredicted RBP7.32□□□□□ -1.24
LSM8-202ENST00000411938 ARID5BQ14865 1188 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 TDRD10Q5VZ19 366 aaKnown RBP7.32□□□□□ -1.24
LSM8-202ENST00000411938 SHC4Q6S5L8 630 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 TPGS1Q6ZTW0 290 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 OSTM1Q86WC4 334 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 ADGRF2Q8IZF7 708 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 ERCC4Q92889 916 aaPredicted RBP7.32□□□□□ -1.24
LSM8-202ENST00000411938 MYLPFQ96A32 169 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 HIC2Q96JB3 615 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 CEP295NLQ96MC4 621 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 ZNF578Q96N58 590 aaPredicted RBP7.32□□□□□ -1.24
LSM8-202ENST00000411938 SYT15Q9BQS2 421 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.32□□□□□ -1.24
LSM8-202ENST00000411938 NACA2Q9H009 215 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 OSGEPQ9NPF4 335 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 KCNK4Q9NYG8 393 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 IFNKQ9P0W0 207 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 WDR35Q9P2L0 1181 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 CGNQ9P2M7 1197 aaKnown RBP7.32□□□□□ -1.24
LSM8-202ENST00000411938 AGAP1Q9UPQ3 857 aa7.32□□□□□ -1.24
LSM8-202ENST00000411938 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.32□□□□□ -1.24
LSM8-202ENST00000411938 MORC2Q9Y6X9 1032 aaPredicted RBP7.32□□□□□ -1.24
LSM8-202ENST00000411938 ARID1BQ8NFD5 2236 aaPredicted RBP7.32□□□□□ -1.24
LSM8-202ENST00000411938 RP1L1Q8IWN7 2480 aaPredicted RBP7.32□□□□□ -1.24
LSM8-202ENST00000411938 ENO4A6NNW6 628 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 F8VP50 259 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 BIN1O00499 593 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 MT-CO3P00414 261 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 TUBB4AP04350 444 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 MYF5P13349 255 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 PLCG1P19174 1290 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 CD27P26842 260 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 ACSL1P33121 698 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 FXR2P51116 673 aaKnown RBP eCLIP7.31□□□□□ -1.24
LSM8-202ENST00000411938 ZNF132P52740 706 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 NOP14P78316 857 aaKnown RBP7.31□□□□□ -1.24
LSM8-202ENST00000411938 TFAMQ00059 246 aaKnown RBP7.31□□□□□ -1.24
LSM8-202ENST00000411938 FANCCQ00597 558 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 NFKB2Q00653 900 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 ILKQ13418 452 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 UBAP2LQ14157 1087 aaKnown RBP7.31□□□□□ -1.24
LSM8-202ENST00000411938 MAPRE1Q15691 268 aaKnown RBP7.31□□□□□ -1.24
LSM8-202ENST00000411938 HECTD3Q5T447 861 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 KRT79Q5XKE5 535 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 FAM171BQ6P995 826 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 KRBA2Q6ZNG9 492 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 KCNK18Q7Z418 384 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 ELOA2Q8IYF1 753 aaPredicted RBP7.31□□□□□ -1.24
LSM8-202ENST00000411938 LSMEM2Q8N112 164 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 CACTIN-AS1Q8N1I8 211 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 DCBLD1Q8N8Z6 715 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 SNRNP27Q8WVK2 155 aaKnown RBP7.31□□□□□ -1.24
LSM8-202ENST00000411938 BHMTQ93088 406 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 BIRC7Q96CA5 298 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 ELF4Q99607 663 aaPredicted RBP7.31□□□□□ -1.24
LSM8-202ENST00000411938 ACE2Q9BYF1 805 aaPredicted RBP7.31□□□□□ -1.24
LSM8-202ENST00000411938 RAB34Q9BZG1 259 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 DPH1Q9BZG8 443 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 TRIM9Q9C026 710 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 LARSQ9P2J5 1176 aaKnown RBP7.31□□□□□ -1.24
LSM8-202ENST00000411938 SEPT3Q9UH03 358 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 HOOK1Q9UJC3 728 aaKnown RBP7.31□□□□□ -1.24
LSM8-202ENST00000411938 SNX9Q9Y5X1 595 aa7.31□□□□□ -1.24
LSM8-202ENST00000411938 PTPRJQ12913 1337 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 ITPR3Q14573 2671 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 NPHP3-ACAD11A0A0J9YXS1 232 aa7.3□□□□□ -1.24
LSM8-202ENST00000411938 PP2D1A8MPX8 630 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms