RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 NCKAP1Q9Y2A7 1128 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZNF510Q9Y2H8 683 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 SLCO1B1Q9Y6L6 691 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 CITO14578 2027 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 ICE1Q9Y2F5 2266 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 TENM4Q6N022 2769 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 TEX15Q9BXT5 2789 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 MYOFQ9NZM1 2061 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 SCN1AP35498 2009 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 ATP8B3O60423 1300 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZNF638Q14966 1978 aaKnown RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 ANKRD17O75179 2603 aaKnown RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 PTPRDP23468 1912 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 ADAMTS9Q9P2N4 1935 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 FAM92AA1XBS5 289 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 GOLGA8IPA6NC78 632 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 VWA3AA6NCI4 1184 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 LRRC72A6NJI9 287 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZNF233A6NK53 670 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 GOLGA8JA6NMD2 632 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 A8MXQ7 604 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 K7ENP7 123 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 CLDN5O00501 218 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 TERTO14746 1132 aaKnown RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 GREM1O60565 184 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 MAGEC1O60732 1142 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 USP12O75317 370 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 PRPF6O94906 941 aaKnown RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 TBX18O95935 607 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 PENKP01210 267 aaPredicted RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 AFPP02771 609 aaKnown RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 WNT1P04628 370 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 MPOP05164 745 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 C7P10643 843 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 SFTPCP11686 197 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 GP1BBP13224 206 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 TRIM21P19474 475 aaKnown RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 GARTP22102 1010 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 ACP1P24666 158 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 PRKCHP24723 683 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 CD38P28907 300 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 EPHA8P29322 1005 aaPredicted RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 RBMS1P29558 406 aaKnown RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 DDIT3P35638 169 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 TOB1P50616 345 aaPredicted RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 NEK4P51957 841 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 COPAP53621 1224 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 CACNA2D1P54289 1103 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 MFAP3P55082 362 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 INHBCP55103 352 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 WNT7BP56706 349 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 NXPH1P58417 271 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 ANAPC15P60006 121 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 RPS14P62263 151 aaKnown RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 TNNC1P63316 161 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 GABREP78334 506 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 ASIC1P78348 528 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 IRX6P78412 446 aaPredicted RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 HMGN5P82970 282 aaKnown RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 COG7P83436 770 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 DAB2P98082 770 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 INSM1Q01101 510 aaPredicted RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 ST3GAL1Q11201 340 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZNF211Q13398 564 aaPredicted RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 SERINC3Q13530 473 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 MCM6Q14566 821 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 SHBQ15464 509 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 GEN1Q17RS7 908 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 DUOXA2Q1HG44 320 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 PROX2Q3B8N5 592 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 WDR72Q3MJ13 1102 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 TMEM119Q4V9L6 283 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 FNDC3BQ53EP0 1204 aaKnown RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 SGO2Q562F6 1265 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 RILPL1Q5EBL4 403 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 C10orf120Q5SQS8 335 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 L1TD1Q5T7N2 865 aaKnown RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 SFMBT2Q5VUG0 894 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 FYB2Q5VWT5 728 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 KIAA1614Q5VZ46 1190 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 ARL6IP4Q66PJ3 421 aaKnown RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 SCARA3Q6AZY7 606 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 INO80CQ6PI98 192 aaPredicted RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 KLHDC10Q6PID8 442 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 CCDC81Q6ZN84 652 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 Q6ZNB5 142 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 USP30Q70CQ3 517 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 TADA2BQ86TJ2 420 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 FAM35AQ86V20 835 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 SFR1Q86XK3 245 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 SYCP3Q8IZU3 236 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 B3GALNT2Q8NCR0 500 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 OR5B17Q8NGF7 314 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 GANCQ8TET4 914 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 NOC3LQ8WTT2 800 aaKnown RBP2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 SORCS1Q8WY21 1168 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 RAD54LQ92698 747 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 GRAMD1AQ96CP6 724 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 SMARCD1Q96GM5 515 aa2.49□□□□□ -2.01
RNU4-53P-201ENST00000410828 PIWIL1Q96J94 861 aaKnown RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms