RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 TBX20Q9UMR3 447 aa4.57□□□□□ -1.68
RNU2-28P-201ENST00000410457 AFG3L2Q9Y4W6 797 aa4.57□□□□□ -1.68
RNU2-28P-201ENST00000410457 PIPSLA2A3N6 862 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 VWA3AA6NCI4 1184 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 VWC2LB2RUY7 222 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 F5H0A9 414 aaPredicted RBP4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 STX16-NPEPL1H3BU86 382 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 M0QZQ0 153 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 STX16O14662 325 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 PRRG2O14669 202 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 PEX1O43933 1283 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 HEXIM1O94992 359 aaKnown RBP4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 CYP3A4P08684 503 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 ITGAMP11215 1152 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 ZFXP17010 805 aaPredicted RBP4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 MATN1P21941 496 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 FOLR3P41439 243 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 TLE3Q04726 772 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 PLP2Q04941 152 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 BFSP2Q13515 415 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 TXNRD1Q16881 649 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 FAM187BQ17R55 369 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 ANO7Q6IWH7 933 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 ACSM6Q6P461 480 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 RNF207Q6ZRF8 634 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 WDR53Q7Z5U6 358 aaPredicted RBP4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 P3H2Q8IVL5 708 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 SIRT6Q8N6T7 355 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 PTGR2Q8N8N7 351 aaPredicted RBP4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 CACTINQ8WUQ7 758 aaKnown RBP4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 GLMPQ8WWB7 406 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 HAS1Q92839 578 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 HVCN1Q96D96 273 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 FBXL20Q96IG2 436 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 PIGSQ96S52 555 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 NPAS1Q99742 590 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 AIFM2Q9BRQ8 373 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 C1QTNF3Q9BXJ4 246 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 AGXT2Q9BYV1 514 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 SNX15Q9NRS6 342 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 SMC4Q9NTJ3 1288 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 DKK3Q9UBP4 350 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 PCDHB7Q9Y5E2 793 aa4.56□□□□□ -1.68
RNU2-28P-201ENST00000410457 CCDC187A0A096LP49 1063 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 DDX58O95786 925 aaKnown RBP4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 HNRNPA1P09651 372 aaKnown RBP eCLIP4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 IFIT1P09914 478 aaKnown RBP4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 ALADP13716 330 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 ZNF37AP17032 561 aaPredicted RBP4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 PCSK6P29122 969 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 CTGFP29279 349 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 PSMC2P35998 433 aaKnown RBP4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 PNPLA4P41247 253 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 FAM3BP58499 235 aaPredicted RBP4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 RPL15P61313 204 aaKnown RBP4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 TXNL4AP83876 142 aaKnown RBP4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 E2F1Q01094 437 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 PDCLQ13371 301 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 PLAC9Q5JTB6 97 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 ZNF484Q5JVG2 852 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 SPDYAQ5MJ70 313 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 WDR45BQ5MNZ6 344 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 ANKRD40Q6AI12 368 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 MZT2BQ6NZ67 158 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 DPY19L3Q6ZPD9 716 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 TTLL10Q6ZVT0 673 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 Q6ZWC4 215 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 PARS2Q7L3T8 475 aaKnown RBP4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 ZNF551Q7Z340 670 aaPredicted RBP4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 PALM2Q8IXS6 379 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 NME8Q8N427 588 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 TCP11L2Q8N4U5 519 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 FAM71DQ8N9W8 422 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 OR52L2PQ8NGH6 319 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 RFFLQ8WZ73 363 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 ST8SIA4Q92187 359 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 RRP36Q96EU6 259 aaKnown RBP4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 CINPQ9BW66 212 aaPredicted RBP4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 KRTAP3-1Q9BYR8 98 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 OSBPL5Q9H0X9 879 aaPredicted RBP4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 PLEKHA2Q9HB19 425 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 PREBQ9HCU5 417 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 FBXO2Q9UK22 296 aaPredicted RBP4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 AMFRQ9UKV5 643 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 TSC22D4Q9Y3Q8 395 aa4.55□□□□□ -1.68
RNU2-28P-201ENST00000410457 TBC1D3DA0A087WVF3 549 aa4.54□□□□□ -1.68
RNU2-28P-201ENST00000410457 TBC1D3IA0A087WXS9 549 aa4.54□□□□□ -1.68
RNU2-28P-201ENST00000410457 TBC1D3EA0A087X179 549 aa4.54□□□□□ -1.68
RNU2-28P-201ENST00000410457 TBC1D3KA0A087X1G2 549 aa4.54□□□□□ -1.68
RNU2-28P-201ENST00000410457 TBC1D3BA6NDS4 549 aa4.54□□□□□ -1.68
RNU2-28P-201ENST00000410457 TBC1D3FA6NER0 549 aaPredicted RBP4.54□□□□□ -1.68
RNU2-28P-201ENST00000410457 C3orf70A6NLC5 250 aaPredicted RBP4.54□□□□□ -1.68
RNU2-28P-201ENST00000410457 TBC1D3LB9A6J9 549 aa4.54□□□□□ -1.68
RNU2-28P-201ENST00000410457 M0QYT0 321 aa4.54□□□□□ -1.68
RNU2-28P-201ENST00000410457 CA12O43570 354 aa4.54□□□□□ -1.68
RNU2-28P-201ENST00000410457 TBX18O95935 607 aa4.54□□□□□ -1.68
RNU2-28P-201ENST00000410457 CHRM2P08172 466 aa4.54□□□□□ -1.68
RNU2-28P-201ENST00000410457 TBC1D3HP0C7X1 549 aa4.54□□□□□ -1.68
RNU2-28P-201ENST00000410457 TMIGD3P0DMS9 266 aaPredicted RBP4.54□□□□□ -1.68
RNU2-28P-201ENST00000410457 MYCLP12524 364 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms