RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 TRIM62Q9BVG3 475 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 ADAM7Q9H2U9 754 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 TPX2Q9ULW0 747 aaKnown RBP14.63□□□□□ -0.07
LIMS2-206ENST00000409754 PCDHA11Q9Y5I1 949 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 PTPRDP23468 1912 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 PLXNA4Q9HCM2 1894 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 GOLGA6CA6NDK9 693 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 GOLGA6L10A6NI86 522 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 IFNB1P01574 187 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 ALDH2P05091 517 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 GOLGA6DP0CG33 693 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 CHKAP35790 457 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 ROR1Q01973 937 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 MRPL58Q14197 206 aaKnown RBP14.62□□□□□ -0.07
LIMS2-206ENST00000409754 MORF4L2Q15014 288 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 SLC39A12Q504Y0 691 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 TTMPQ5BVD1 217 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 VARS2Q5ST30 1063 aaKnown RBP14.62□□□□□ -0.07
LIMS2-206ENST00000409754 DENND2CQ68D51 928 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 C1orf228Q6PIY5 440 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 NPNTQ6UXI9 565 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 PCGF5Q86SE9 256 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 SLC7A14Q8TBB6 771 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 NTAN1Q96AB6 310 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 FUBP3Q96I24 572 aaKnown RBP eCLIP14.62□□□□□ -0.07
LIMS2-206ENST00000409754 CSPG4P5Q96PW8 444 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 RAD9AQ99638 391 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 SEMA4AQ9H3S1 761 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 TMBIM4Q9HC24 238 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 MARCH5Q9NX47 278 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 GOLGA6AQ9NYA3 693 aa14.62□□□□□ -0.07
LIMS2-206ENST00000409754 LINC01553A4QN01 128 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 CFAP69A5D8W1 941 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 EPOPA6NHQ4 379 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 OR6C75A6NL08 312 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 RIPK2O43353 540 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 TLL1O43897 1013 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 F9P00740 461 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 MYZAPP0CAP1 466 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 NCAM1P13591 858 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 FGFR3P22607 806 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 ARL4AP40617 200 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 SLC11A1P49279 550 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 GDF10P55107 478 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 SCAPQ12770 1279 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 ELAVL2Q12926 359 aaKnown RBP14.61□□□□□ -0.07
LIMS2-206ENST00000409754 NME3Q13232 169 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 TERF2Q15554 542 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 RNASEH2BQ5TBB1 312 aaKnown RBP14.61□□□□□ -0.07
LIMS2-206ENST00000409754 DARS2Q6PI48 645 aaKnown RBP14.61□□□□□ -0.07
LIMS2-206ENST00000409754 CCDC25Q86WR0 208 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 RELL1Q8IUW5 271 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 UNC45BQ8IWX7 931 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 ZCCHC9Q8N567 271 aaKnown RBP14.61□□□□□ -0.07
LIMS2-206ENST00000409754 OR2W6PQ8NHA6 318 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 FAM204AQ9H8W3 233 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 PIGVQ9NUD9 493 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 CWC15Q9P013 229 aaKnown RBP14.61□□□□□ -0.07
LIMS2-206ENST00000409754 ADAM21Q9UKJ8 722 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 SHOC2Q9UQ13 582 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 MRPL42Q9Y6G3 142 aaKnown RBP14.61□□□□□ -0.07
LIMS2-206ENST00000409754 PATJQ8NI35 1801 aa14.61□□□□□ -0.07
LIMS2-206ENST00000409754 MYO9BQ13459 2157 aa14.6□□□□□ -0.07
LIMS2-206ENST00000409754 SF3B1O75533 1304 aaKnown RBP eCLIP14.6□□□□□ -0.07
LIMS2-206ENST00000409754 TBKBP1A7MCY6 615 aa14.6□□□□□ -0.07
LIMS2-206ENST00000409754 H7C0C1 242 aa14.6□□□□□ -0.07
LIMS2-206ENST00000409754 TNFRSF10BO14763 440 aa14.6□□□□□ -0.07
LIMS2-206ENST00000409754 OR4Q2P0C623 313 aa14.6□□□□□ -0.07
LIMS2-206ENST00000409754 GRIK1P39086 918 aa14.6□□□□□ -0.07
LIMS2-206ENST00000409754 ATP5OP48047 213 aa14.6□□□□□ -0.07
LIMS2-206ENST00000409754 NR2C2P49116 596 aa14.6□□□□□ -0.07
LIMS2-206ENST00000409754 GYS2P54840 703 aa14.6□□□□□ -0.07
LIMS2-206ENST00000409754 XRCC4Q13426 336 aa14.6□□□□□ -0.07
LIMS2-206ENST00000409754 EFHC2Q5JST6 749 aa14.6□□□□□ -0.07
LIMS2-206ENST00000409754 FAM171A1Q5VUB5 890 aa14.6□□□□□ -0.07
LIMS2-206ENST00000409754 BSPRYQ5W0U4 402 aa14.6□□□□□ -0.07
LIMS2-206ENST00000409754 ZNF280DQ6N043 979 aa14.6□□□□□ -0.07
LIMS2-206ENST00000409754 VSTM1Q6UX27 236 aa14.6□□□□□ -0.07
LIMS2-206ENST00000409754 LRRC43Q8N309 656 aa14.6□□□□□ -0.07
LIMS2-206ENST00000409754 EXOC4Q96A65 974 aa14.6□□□□□ -0.07
LIMS2-206ENST00000409754 CDC42EP4Q9H3Q1 356 aaKnown RBP14.6□□□□□ -0.07
LIMS2-206ENST00000409754 CWH43Q9H720 699 aa14.6□□□□□ -0.07
LIMS2-206ENST00000409754 C10orf88Q9H8K7 445 aa14.6□□□□□ -0.07
LIMS2-206ENST00000409754 WDR6Q9NNW5 1121 aaKnown RBP14.6□□□□□ -0.07
LIMS2-206ENST00000409754 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.59□□□□□ -0.07
LIMS2-206ENST00000409754 SYNJ2BP-COX16A0A087WUM0 186 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 BCLAF3A2AJT9 711 aaKnown RBP14.59□□□□□ -0.07
LIMS2-206ENST00000409754 HMGB1P1B2RPK0 211 aaPredicted RBP14.59□□□□□ -0.07
LIMS2-206ENST00000409754 H3BRJ5 948 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 SMAPO00193 183 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 GALTP07902 379 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 RPL22P35268 128 aaKnown RBP14.59□□□□□ -0.07
LIMS2-206ENST00000409754 ADRA1BP35368 520 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 MAGEA11P43364 429 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 SLC5A3P53794 718 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 IFFO1Q0D2I5 559 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 SLC29A2Q14542 456 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 CTXN3Q4LDR2 81 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 FUT10Q6P4F1 479 aa14.59□□□□□ -0.07
LIMS2-206ENST00000409754 CROCCP2Q86T23 111 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms