RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 SYNCRIPO60506 623 aaKnown RBP17.76■□□□□ 0.43
SCRN1-203ENST00000409570 PRKCHP24723 683 aa17.76■□□□□ 0.43
SCRN1-203ENST00000409570 CSNK1EP49674 416 aaKnown RBP17.76■□□□□ 0.43
SCRN1-203ENST00000409570 KNOP1Q1ED39 458 aaKnown RBP17.76■□□□□ 0.43
SCRN1-203ENST00000409570 SGSM1Q2NKQ1 1148 aa17.76■□□□□ 0.43
SCRN1-203ENST00000409570 SPOPLQ6IQ16 392 aa17.76■□□□□ 0.43
SCRN1-203ENST00000409570 CACUL1Q86Y37 369 aa17.76■□□□□ 0.43
SCRN1-203ENST00000409570 LINC00301Q8NCQ3 95 aa17.76■□□□□ 0.43
SCRN1-203ENST00000409570 UCMAQ8WVF2 138 aa17.76■□□□□ 0.43
SCRN1-203ENST00000409570 TWNKQ96RR1 684 aa17.76■□□□□ 0.43
SCRN1-203ENST00000409570 PNPLA8Q9NP80 782 aa17.76■□□□□ 0.43
SCRN1-203ENST00000409570 SLC39A2Q9NP94 309 aa17.76■□□□□ 0.43
SCRN1-203ENST00000409570 TFIP11Q9UBB9 837 aaKnown RBP17.76■□□□□ 0.43
SCRN1-203ENST00000409570 CLEC4EQ9ULY5 219 aa17.76■□□□□ 0.43
SCRN1-203ENST00000409570 ZNF510Q9Y2H8 683 aa17.76■□□□□ 0.43
SCRN1-203ENST00000409570 PLXNA2O75051 1894 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 PTPRQQ9UMZ3 2332 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 GOLGA8CPA6NN73 597 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 ACADMP11310 421 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 P4HA1P13674 534 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 ASPAP45381 313 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 KIF11P52732 1056 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 DLG4P78352 724 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 STK38Q15208 465 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 ZACNQ401N2 412 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 ANKS1BQ7Z6G8 1248 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 GALNT15Q8N3T1 639 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 IQUBQ8NA54 791 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 SORCS1Q8WY21 1168 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 CRELD1Q96HD1 420 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 PCED1AQ9H1Q7 454 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 BLZF1Q9H2G9 400 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 DMAC2Q9NW81 257 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 ELOVL2Q9NXB9 296 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 NAGPAQ9UK23 515 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.75■□□□□ 0.43
SCRN1-203ENST00000409570 MTMR6Q9Y217 621 aa17.75■□□□□ 0.43
SCRN1-203ENST00000409570 FAM149AA5PLN7 773 aa17.74■□□□□ 0.43
SCRN1-203ENST00000409570 ASS1P00966 412 aaKnown RBP17.74■□□□□ 0.43
SCRN1-203ENST00000409570 CHKAP35790 457 aa17.74■□□□□ 0.43
SCRN1-203ENST00000409570 PSEN1P49768 467 aa17.74■□□□□ 0.43
SCRN1-203ENST00000409570 SUZ12Q15022 739 aaKnown RBP17.74■□□□□ 0.43
SCRN1-203ENST00000409570 PTPRNQ16849 979 aa17.74■□□□□ 0.43
SCRN1-203ENST00000409570 KIF19Q2TAC6 998 aa17.74■□□□□ 0.43
SCRN1-203ENST00000409570 TMEM215Q68D42 235 aa17.74■□□□□ 0.43
SCRN1-203ENST00000409570 CCDC186Q7Z3E2 898 aa17.74■□□□□ 0.43
SCRN1-203ENST00000409570 TADA2BQ86TJ2 420 aa17.74■□□□□ 0.43
SCRN1-203ENST00000409570 FAM124AQ86V42 546 aa17.74■□□□□ 0.43
SCRN1-203ENST00000409570 SCUBE3Q8IX30 993 aa17.74■□□□□ 0.43
SCRN1-203ENST00000409570 CYFIP2Q96F07 1278 aa17.74■□□□□ 0.43
SCRN1-203ENST00000409570 C6orf106Q9H6K1 298 aaPredicted RBP17.74■□□□□ 0.43
SCRN1-203ENST00000409570 SNX11Q9Y5W9 270 aa17.74■□□□□ 0.43
SCRN1-203ENST00000409570 A0A087WV48 116 aa17.73■□□□□ 0.43
SCRN1-203ENST00000409570 SPTLC2O15270 562 aa17.73■□□□□ 0.43
SCRN1-203ENST00000409570 STX6O43752 255 aa17.73■□□□□ 0.43
SCRN1-203ENST00000409570 RPN1P04843 607 aaKnown RBP17.73■□□□□ 0.43
SCRN1-203ENST00000409570 EPHX1P07099 455 aa17.73■□□□□ 0.43
SCRN1-203ENST00000409570 HMBSP08397 361 aa17.73■□□□□ 0.43
SCRN1-203ENST00000409570 RALAP11233 206 aa17.73■□□□□ 0.43
SCRN1-203ENST00000409570 CORO1AP31146 461 aaKnown RBP17.73■□□□□ 0.43
SCRN1-203ENST00000409570 AFF3P51826 1226 aaKnown RBP17.73■□□□□ 0.43
SCRN1-203ENST00000409570 COG7P83436 770 aa17.73■□□□□ 0.43
SCRN1-203ENST00000409570 INCA1Q0VD86 236 aa17.73■□□□□ 0.43
SCRN1-203ENST00000409570 EIF4HQ15056 248 aaKnown RBP17.73■□□□□ 0.43
SCRN1-203ENST00000409570 SHC4Q6S5L8 630 aa17.73■□□□□ 0.43
SCRN1-203ENST00000409570 SV2AQ7L0J3 742 aa17.73■□□□□ 0.43
SCRN1-203ENST00000409570 SNX19Q92543 992 aa17.73■□□□□ 0.43
SCRN1-203ENST00000409570 TAF4BQ92750 862 aa17.73■□□□□ 0.43
SCRN1-203ENST00000409570 DCLK3Q9C098 648 aa17.73■□□□□ 0.43
SCRN1-203ENST00000409570 CLIC5Q9NZA1 410 aa17.73■□□□□ 0.43
SCRN1-203ENST00000409570 RASAL2Q9UJF2 1139 aa17.73■□□□□ 0.43
SCRN1-203ENST00000409570 AGO1Q9UL18 857 aaKnown RBP17.73■□□□□ 0.43
SCRN1-203ENST00000409570 USP3Q9Y6I4 520 aa17.73■□□□□ 0.43
SCRN1-203ENST00000409570 COL5A1P20908 1838 aaPredicted RBP17.72■□□□□ 0.43
SCRN1-203ENST00000409570 KALRNO60229 2985 aa17.72■□□□□ 0.43
SCRN1-203ENST00000409570 ASH1LQ9NR48 2969 aaKnown RBP17.72■□□□□ 0.43
SCRN1-203ENST00000409570 PVALEFA0A1B0GWK0 134 aa17.72■□□□□ 0.43
SCRN1-203ENST00000409570 EIF4E1BA6NMX2 242 aaKnown RBP17.72■□□□□ 0.43
SCRN1-203ENST00000409570 TNFSF14O43557 240 aa17.72■□□□□ 0.43
SCRN1-203ENST00000409570 PPP6R2O75170 966 aa17.72■□□□□ 0.43
SCRN1-203ENST00000409570 ZIC2O95409 532 aaPredicted RBP17.72■□□□□ 0.43
SCRN1-203ENST00000409570 C7P10643 843 aa17.72■□□□□ 0.43
SCRN1-203ENST00000409570 HLA-EP13747 358 aa17.72■□□□□ 0.43
SCRN1-203ENST00000409570 ACSL1P33121 698 aa17.72■□□□□ 0.43
SCRN1-203ENST00000409570 EFEMP1Q12805 493 aa17.72■□□□□ 0.43
SCRN1-203ENST00000409570 CAMK2GQ13555 558 aaPredicted RBP17.72■□□□□ 0.43
SCRN1-203ENST00000409570 E2F5Q15329 346 aa17.72■□□□□ 0.43
SCRN1-203ENST00000409570 SMAD1Q15797 465 aaKnown RBP17.72■□□□□ 0.43
SCRN1-203ENST00000409570 SERPINA13PQ6UXR4 307 aa17.72■□□□□ 0.43
SCRN1-203ENST00000409570 DENND1CQ8IV53 801 aa17.72■□□□□ 0.43
SCRN1-203ENST00000409570 SLC9A9Q8IVB4 645 aa17.72■□□□□ 0.43
SCRN1-203ENST00000409570 CPXM2Q8N436 756 aa17.72■□□□□ 0.43
SCRN1-203ENST00000409570 OR2T3Q8NH03 318 aa17.72■□□□□ 0.43
SCRN1-203ENST00000409570 GOLGA5Q8TBA6 731 aa17.72■□□□□ 0.43
SCRN1-203ENST00000409570 CIPCQ9C0C6 399 aa17.72■□□□□ 0.43
SCRN1-203ENST00000409570 LHX5Q9H2C1 402 aa17.72■□□□□ 0.43
SCRN1-203ENST00000409570 ZSCAN16Q9H4T2 348 aaPredicted RBP17.72■□□□□ 0.43
SCRN1-203ENST00000409570 MAGEF1Q9HAY2 307 aa17.72■□□□□ 0.43
SCRN1-203ENST00000409570 OSGEPQ9NPF4 335 aa17.72■□□□□ 0.43
SCRN1-203ENST00000409570 ANKRD6Q9Y2G4 727 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms