RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 HADHQ16836 314 aaKnown RBP13.55□□□□□ -0.24
LIMS2-203ENST00000409254 BOLA3Q53S33 107 aa13.55□□□□□ -0.24
LIMS2-203ENST00000409254 TXNDC8Q6A555 127 aa13.55□□□□□ -0.24
LIMS2-203ENST00000409254 DAAM2Q86T65 1068 aa13.55□□□□□ -0.24
LIMS2-203ENST00000409254 DNAAF5Q86Y56 855 aa13.55□□□□□ -0.24
LIMS2-203ENST00000409254 PLCD3Q8N3E9 789 aa13.55□□□□□ -0.24
LIMS2-203ENST00000409254 CELF5Q8N6W0 485 aaKnown RBP13.55□□□□□ -0.24
LIMS2-203ENST00000409254 MAB21L3Q8N8X9 362 aa13.55□□□□□ -0.24
LIMS2-203ENST00000409254 SMARCD2Q92925 531 aa13.55□□□□□ -0.24
LIMS2-203ENST00000409254 BTN2A3PQ96KV6 586 aa13.55□□□□□ -0.24
LIMS2-203ENST00000409254 HAPLN3Q96S86 360 aa13.55□□□□□ -0.24
LIMS2-203ENST00000409254 KLF16Q9BXK1 252 aaPredicted RBP13.55□□□□□ -0.24
LIMS2-203ENST00000409254 SLC46A2Q9BY10 475 aa13.55□□□□□ -0.24
LIMS2-203ENST00000409254 POMKQ9H5K3 350 aa13.55□□□□□ -0.24
LIMS2-203ENST00000409254 ARHGEF38Q9NXL2 777 aa13.55□□□□□ -0.24
LIMS2-203ENST00000409254 PRKAG3Q9UGI9 489 aa13.55□□□□□ -0.24
LIMS2-203ENST00000409254 SLC12A6Q9UHW9 1150 aa13.55□□□□□ -0.24
LIMS2-203ENST00000409254 SALL4Q9UJQ4 1053 aa13.55□□□□□ -0.24
LIMS2-203ENST00000409254 LSM7Q9UK45 103 aaKnown RBP13.55□□□□□ -0.24
LIMS2-203ENST00000409254 UNC80Q8N2C7 3258 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 NUP205Q92621 2012 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 MACROD2A1Z1Q3 448 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 CCDC66A2RUB6 948 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 KIF2AO00139 706 aaPredicted RBP13.54□□□□□ -0.24
LIMS2-203ENST00000409254 SLC9A3R1O14745 358 aaPredicted RBP13.54□□□□□ -0.24
LIMS2-203ENST00000409254 PRPSAP2O60256 369 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 KIF5CO60282 957 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 HARS2P49590 506 aaKnown RBP13.54□□□□□ -0.24
LIMS2-203ENST00000409254 EFEMP1Q12805 493 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 EP400NLQ6ZTU2 488 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 GET4Q7L5D6 327 aaPredicted RBP13.54□□□□□ -0.24
LIMS2-203ENST00000409254 ZSCAN30Q86W11 494 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 FAM217AQ8IXS0 508 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 ARL14EPQ8N8R7 260 aaPredicted RBP13.54□□□□□ -0.24
LIMS2-203ENST00000409254 ATP6V0D2Q8N8Y2 350 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 ITFG1Q8TB96 612 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 DEPDC1BQ8WUY9 529 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 FCRL2Q96LA5 508 aaPredicted RBP13.54□□□□□ -0.24
LIMS2-203ENST00000409254 DDX50Q9BQ39 737 aaKnown RBP13.54□□□□□ -0.24
LIMS2-203ENST00000409254 PHF7Q9BWX1 381 aaPredicted RBP13.54□□□□□ -0.24
LIMS2-203ENST00000409254 TRIM7Q9C029 511 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 RNF38Q9H0F5 515 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 PRDM16Q9HAZ2 1276 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 TRPC7Q9HCX4 862 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 LZTFL1Q9NQ48 299 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 PIGVQ9NUD9 493 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 RCOR3Q9P2K3 495 aaPredicted RBP13.54□□□□□ -0.24
LIMS2-203ENST00000409254 TBC1D14Q9P2M4 693 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 RASAL2Q9UJF2 1139 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 GUCA1BQ9UMX6 200 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.54□□□□□ -0.24
LIMS2-203ENST00000409254 CPQQ9Y646 472 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 DUSP10Q9Y6W6 482 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 MIA3Q5JRA6 1907 aa13.54□□□□□ -0.24
LIMS2-203ENST00000409254 COL4A2P08572 1712 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 GRID2IPA4D2P6 1211 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 GRXCR2A6NFK2 248 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 KCNU1A8MYU2 1149 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 ECI2O75521 394 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 STC2O76061 302 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 LAMP2P13473 410 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 SLC11A2P49281 568 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 NAP1L1P55209 391 aaKnown RBP13.53□□□□□ -0.24
LIMS2-203ENST00000409254 ATP11AP98196 1134 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 SLC25A11Q02978 314 aaKnown RBP13.53□□□□□ -0.24
LIMS2-203ENST00000409254 MESDQ14696 234 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 ZNF77Q15935 545 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 C15orf59Q2T9L4 293 aaPredicted RBP13.53□□□□□ -0.24
LIMS2-203ENST00000409254 Q6ZNB5 142 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 HTR3DQ70Z44 454 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 ARID3BQ8IVW6 561 aaPredicted RBP13.53□□□□□ -0.24
LIMS2-203ENST00000409254 RHOT1Q8IXI2 618 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 ZDHHC14Q8IZN3 488 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 CPXM2Q8N436 756 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 TDRD5Q8NAT2 981 aaKnown RBP13.53□□□□□ -0.24
LIMS2-203ENST00000409254 ZSCAN18Q8TBC5 510 aaPredicted RBP13.53□□□□□ -0.24
LIMS2-203ENST00000409254 CD101Q93033 1021 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 ELSPBP1Q96BH3 223 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 C1orf74Q96LT6 269 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 OSBPL2Q9H1P3 480 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 WDCPQ9H6R7 721 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 DDX56Q9NY93 547 aaKnown RBP13.53□□□□□ -0.24
LIMS2-203ENST00000409254 DONSONQ9NYP3 566 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 THEGQ9P2T0 379 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 USP18Q9UMW8 372 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 ALG6Q9Y672 507 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 CAPN6Q9Y6Q1 641 aa13.53□□□□□ -0.24
LIMS2-203ENST00000409254 TICRRQ7Z2Z1 1910 aa13.52□□□□□ -0.24
LIMS2-203ENST00000409254 F5P12259 2224 aa13.52□□□□□ -0.24
LIMS2-203ENST00000409254 SLC12A8A0AV02 714 aa13.52□□□□□ -0.25
LIMS2-203ENST00000409254 H3BQ06 376 aaPredicted RBP13.52□□□□□ -0.25
LIMS2-203ENST00000409254 SPOPO43791 374 aa13.52□□□□□ -0.25
LIMS2-203ENST00000409254 GJB6O95452 261 aa13.52□□□□□ -0.25
LIMS2-203ENST00000409254 TBX18O95935 607 aa13.52□□□□□ -0.25
LIMS2-203ENST00000409254 CTNNA2P26232 953 aa13.52□□□□□ -0.25
LIMS2-203ENST00000409254 MIPP30301 263 aa13.52□□□□□ -0.25
LIMS2-203ENST00000409254 CTNNA1P35221 906 aaKnown RBP13.52□□□□□ -0.25
LIMS2-203ENST00000409254 ADRA1BP35368 520 aa13.52□□□□□ -0.25
LIMS2-203ENST00000409254 PITX1P78337 314 aaPredicted RBP13.52□□□□□ -0.25
LIMS2-203ENST00000409254 FCHO2Q0JRZ9 810 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms