RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 A8MXQ7 604 aa17.12■□□□□ 0.33
COL23A1-202ENST00000407622 IL1BP01584 269 aa17.12■□□□□ 0.33
COL23A1-202ENST00000407622 KITP10721 976 aa17.12■□□□□ 0.33
COL23A1-202ENST00000407622 NCBP2-AS2Q69YL0 99 aa17.12■□□□□ 0.33
COL23A1-202ENST00000407622 ZCCHC23Q6ZST2 131 aa17.12■□□□□ 0.33
COL23A1-202ENST00000407622 NT5DC4Q86YG4 428 aa17.12■□□□□ 0.33
COL23A1-202ENST00000407622 TTC39CQ8N584 583 aa17.12■□□□□ 0.33
COL23A1-202ENST00000407622 C2orf69Q8N8R5 385 aa17.12■□□□□ 0.33
COL23A1-202ENST00000407622 FBXO27Q8NI29 283 aa17.12■□□□□ 0.33
COL23A1-202ENST00000407622 GSDMBQ8TAX9 411 aa17.12■□□□□ 0.33
COL23A1-202ENST00000407622 MS4A4AQ96JQ5 239 aa17.12■□□□□ 0.33
COL23A1-202ENST00000407622 TMPRSS4Q9NRS4 437 aa17.12■□□□□ 0.33
COL23A1-202ENST00000407622 TAS2R1Q9NYW7 299 aa17.12■□□□□ 0.33
COL23A1-202ENST00000407622 A6NJR5 290 aa17.11■□□□□ 0.33
COL23A1-202ENST00000407622 GOT1P17174 413 aa17.11■□□□□ 0.33
COL23A1-202ENST00000407622 PTDSS1P48651 473 aaKnown RBP17.11■□□□□ 0.33
COL23A1-202ENST00000407622 IRX4P78413 519 aa17.11■□□□□ 0.33
COL23A1-202ENST00000407622 CRYMQ14894 314 aa17.11■□□□□ 0.33
COL23A1-202ENST00000407622 ZNF792Q3KQV3 632 aa17.11■□□□□ 0.33
COL23A1-202ENST00000407622 MDH1BQ5I0G3 518 aa17.11■□□□□ 0.33
COL23A1-202ENST00000407622 TREML1Q86YW5 311 aa17.11■□□□□ 0.33
COL23A1-202ENST00000407622 ARID3BQ8IVW6 561 aaPredicted RBP17.11■□□□□ 0.33
COL23A1-202ENST00000407622 NDUFAF2Q8N183 169 aa17.11■□□□□ 0.33
COL23A1-202ENST00000407622 CENPIQ92674 756 aaPredicted RBP17.11■□□□□ 0.33
COL23A1-202ENST00000407622 E2F7Q96AV8 911 aa17.11■□□□□ 0.33
COL23A1-202ENST00000407622 QKIQ96PU8 341 aaKnown RBP eCLIP17.11■□□□□ 0.33
COL23A1-202ENST00000407622 LGMNQ99538 433 aa17.11■□□□□ 0.33
COL23A1-202ENST00000407622 FAM167BQ9BTA0 163 aa17.11■□□□□ 0.33
COL23A1-202ENST00000407622 CEP41Q9BYV8 373 aa17.11■□□□□ 0.33
COL23A1-202ENST00000407622 FAM49AQ9H0Q0 323 aaPredicted RBP17.11■□□□□ 0.33
COL23A1-202ENST00000407622 SIRPGQ9P1W8 387 aa17.11■□□□□ 0.33
COL23A1-202ENST00000407622 GYG2O15488 501 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 SETSIPP0DME0 302 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 PTPN9P43378 593 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 OCRLQ01968 901 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 KPNB1Q14974 876 aaKnown RBP17.1■□□□□ 0.33
COL23A1-202ENST00000407622 ZBTB6Q15916 424 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 NBPF20Q3BBV1 942 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 APBB1IPQ7Z5R6 666 aaPredicted RBP17.1■□□□□ 0.33
COL23A1-202ENST00000407622 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.1■□□□□ 0.33
COL23A1-202ENST00000407622 WDR60Q8WVS4 1066 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 KBTBD7Q8WVZ9 684 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 APOL6Q9BWW8 343 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 KATNBL1Q9H079 304 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 NXF3Q9H4D5 531 aaKnown RBP17.1■□□□□ 0.33
COL23A1-202ENST00000407622 SETD4Q9NVD3 440 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 RALGAPA2Q2PPJ7 1873 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 COL1A2P08123 1366 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 CENPFP49454 3210 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 DNAH12Q6ZR08 3092 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 WDR27A2RRH5 827 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 SPTLC1O15269 473 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 HNRNPCL1O60812 293 aaKnown RBP17.1■□□□□ 0.33
COL23A1-202ENST00000407622 TPSB2P20231 275 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 AKAP5P24588 427 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 PITX1P78337 314 aaPredicted RBP17.1■□□□□ 0.33
COL23A1-202ENST00000407622 TPSAB1Q15661 275 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 CST9Q5W186 159 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 TRIM68Q6AZZ1 485 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 SLC26A9Q7LBE3 791 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 FAM131BQ86XD5 332 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 ADGRF2Q8IZF7 708 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 LRRC39Q96DD0 335 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 NAF1Q96HR8 494 aaKnown RBP17.1■□□□□ 0.33
COL23A1-202ENST00000407622 PCDHA11Q9Y5I1 949 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 USP3Q9Y6I4 520 aa17.1■□□□□ 0.33
COL23A1-202ENST00000407622 I3L4J1 428 aa17.09■□□□□ 0.33
COL23A1-202ENST00000407622 KRT38O76015 456 aa17.09■□□□□ 0.33
COL23A1-202ENST00000407622 ESRRAP11474 423 aaPredicted RBP17.09■□□□□ 0.33
COL23A1-202ENST00000407622 SESN3P58005 492 aa17.09■□□□□ 0.33
COL23A1-202ENST00000407622 ACSBG2Q5FVE4 666 aa17.09■□□□□ 0.33
COL23A1-202ENST00000407622 C9orf57Q5W0N0 161 aa17.09■□□□□ 0.33
COL23A1-202ENST00000407622 NUDCD3Q8IVD9 361 aa17.09■□□□□ 0.33
COL23A1-202ENST00000407622 DEPDC1BQ8WUY9 529 aa17.09■□□□□ 0.33
COL23A1-202ENST00000407622 C7orf26Q96N11 449 aa17.09■□□□□ 0.33
COL23A1-202ENST00000407622 PGLYRP2Q96PD5 576 aa17.09■□□□□ 0.33
COL23A1-202ENST00000407622 ADAMTS10Q9H324 1103 aa17.09■□□□□ 0.33
COL23A1-202ENST00000407622 FAM124BQ9H5Z6 455 aaPredicted RBP17.09■□□□□ 0.33
COL23A1-202ENST00000407622 LRRC42Q9Y546 428 aa17.09■□□□□ 0.33
COL23A1-202ENST00000407622 SKAP2O75563 359 aaPredicted RBP17.09■□□□□ 0.33
COL23A1-202ENST00000407622 KRT36O76013 467 aa17.09■□□□□ 0.33
COL23A1-202ENST00000407622 SNAI1O95863 264 aaPredicted RBP17.09■□□□□ 0.33
COL23A1-202ENST00000407622 BST2Q10589 180 aaKnown RBP17.09■□□□□ 0.33
COL23A1-202ENST00000407622 SEMA5AQ13591 1074 aa17.09■□□□□ 0.33
COL23A1-202ENST00000407622 KRT72Q14CN4 511 aa17.09■□□□□ 0.33
COL23A1-202ENST00000407622 LGSNQ5TDP6 509 aa17.09■□□□□ 0.33
COL23A1-202ENST00000407622 ARHGAP17Q68EM7 881 aa17.09■□□□□ 0.33
COL23A1-202ENST00000407622 HEATR6Q6AI08 1181 aaKnown RBP17.09■□□□□ 0.33
COL23A1-202ENST00000407622 C16orf46Q6P387 395 aa17.09■□□□□ 0.33
COL23A1-202ENST00000407622 MKS1Q9NXB0 559 aa17.09■□□□□ 0.33
COL23A1-202ENST00000407622 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.09■□□□□ 0.33
COL23A1-202ENST00000407622 IL1RAPL1Q9NZN1 696 aa17.09■□□□□ 0.33
COL23A1-202ENST00000407622 PLXNB2O15031 1838 aa17.09■□□□□ 0.33
COL23A1-202ENST00000407622 ADCY6O43306 1168 aa17.08■□□□□ 0.33
COL23A1-202ENST00000407622 MFSD11O43934 449 aa17.08■□□□□ 0.33
COL23A1-202ENST00000407622 RECQL4O94761 1208 aa17.08■□□□□ 0.33
COL23A1-202ENST00000407622 RARBP10826 455 aa17.08■□□□□ 0.33
COL23A1-202ENST00000407622 TKTP29401 623 aaKnown RBP17.08■□□□□ 0.33
COL23A1-202ENST00000407622 GMPRP36959 345 aa17.08■□□□□ 0.33
COL23A1-202ENST00000407622 GTF2A2P52657 109 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms