RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 CRACR2AQ9BSW2 395 aa20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 OLA1Q9NTK5 396 aaKnown RBP20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 CLEC4EQ9ULY5 219 aa20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 CEP192Q8TEP8 1941 aa20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 MSI1O43347 362 aaKnown RBP20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 FGFR1OPO95684 399 aaKnown RBP20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 GABRG2P18507 467 aa20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 MAP7D1Q3KQU3 841 aa20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 KIAA1211LQ6NV74 962 aa20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 C11orf74Q86VG3 221 aa20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 SCML4Q8N228 414 aa20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 CD248Q9HCU0 757 aa20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 UBE2TQ9NPD8 197 aaPredicted RBP20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 VPS45Q9NRW7 570 aa20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 ABCC13Q9NSE7 274 aa20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 CACNA2D2Q9NY47 1150 aa20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 MBD1Q9UIS9 605 aaPredicted RBP20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 CNTN6Q9UQ52 1028 aa20.16■□□□□ 0.82
SMARCB1-204ENST00000407422 TNRC6BQ9UPQ9 1833 aaKnown RBP20.15■□□□□ 0.82
SMARCB1-204ENST00000407422 WASH3PC4AMC7 463 aa20.15■□□□□ 0.82
SMARCB1-204ENST00000407422 CAVIN2O95810 425 aa20.15■□□□□ 0.82
SMARCB1-204ENST00000407422 KRT5P13647 590 aa20.15■□□□□ 0.82
SMARCB1-204ENST00000407422 PI4KAP42356 2102 aa20.15■□□□□ 0.82
SMARCB1-204ENST00000407422 MFAP3P55082 362 aa20.15■□□□□ 0.82
SMARCB1-204ENST00000407422 STILQ15468 1287 aa20.15■□□□□ 0.82
SMARCB1-204ENST00000407422 GEN1Q17RS7 908 aa20.15■□□□□ 0.82
SMARCB1-204ENST00000407422 GJB7Q6PEY0 223 aa20.15■□□□□ 0.82
SMARCB1-204ENST00000407422 IRF2BP1Q8IU81 584 aa20.15■□□□□ 0.82
SMARCB1-204ENST00000407422 FAM217AQ8IXS0 508 aa20.15■□□□□ 0.82
SMARCB1-204ENST00000407422 CPXM2Q8N436 756 aa20.15■□□□□ 0.82
SMARCB1-204ENST00000407422 SLC27A6Q9Y2P4 619 aa20.15■□□□□ 0.82
SMARCB1-204ENST00000407422 HBS1LQ9Y450 684 aaKnown RBP20.15■□□□□ 0.82
SMARCB1-204ENST00000407422 RAD54BQ9Y620 910 aa20.15■□□□□ 0.82
SMARCB1-204ENST00000407422 HARS2P49590 506 aaKnown RBP20.14■□□□□ 0.81
SMARCB1-204ENST00000407422 APBA1Q02410 837 aa20.14■□□□□ 0.81
SMARCB1-204ENST00000407422 GABRG3Q99928 467 aa20.14■□□□□ 0.81
SMARCB1-204ENST00000407422 ACP6Q9NPH0 428 aa20.14■□□□□ 0.81
SMARCB1-204ENST00000407422 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 DHPSP49366 369 aaPredicted RBP20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 SDE2Q6IQ49 451 aa20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 TMEFF1Q8IYR6 380 aa20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 IPO4Q8TEX9 1081 aaKnown RBP20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 DDI1Q8WTU0 396 aa20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 IRGQQ8WZA9 623 aa20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 PIWIL1Q96J94 861 aaKnown RBP20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 SPACA7Q96KW9 195 aa20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 HSFY1Q96LI6 401 aa20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 MIS12Q9H081 205 aa20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 CALCOCO1Q9P1Z2 691 aa20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 MAP3K13O43283 966 aa20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 TSPAN3O60637 253 aa20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 CYBBP04839 570 aa20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 SLC9A1P19634 815 aa20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 GPD2P43304 727 aa20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 DENND1BQ6P3S1 775 aa20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 TRIM65Q6PJ69 517 aa20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 ARMCX6Q7L4S7 300 aa20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 SCUBE3Q8IX30 993 aa20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 SLC6A17Q9H1V8 727 aa20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 CLSTN2Q9H4D0 955 aa20.13■□□□□ 0.81
SMARCB1-204ENST00000407422 PATE3B3GLJ2 98 aa20.12■□□□□ 0.81
SMARCB1-204ENST00000407422 LTFP02788 710 aa20.12■□□□□ 0.81
SMARCB1-204ENST00000407422 NDUFV2P19404 249 aa20.12■□□□□ 0.81
SMARCB1-204ENST00000407422 PTGER3P43115 390 aa20.12■□□□□ 0.81
SMARCB1-204ENST00000407422 STPG1Q5TH74 334 aa20.12■□□□□ 0.81
SMARCB1-204ENST00000407422 MSANTD2Q6P1R3 559 aa20.12■□□□□ 0.81
SMARCB1-204ENST00000407422 LPCAT2Q7L5N7 544 aa20.12■□□□□ 0.81
SMARCB1-204ENST00000407422 CYP2U1Q7Z449 544 aa20.12■□□□□ 0.81
SMARCB1-204ENST00000407422 MLKLQ8NB16 471 aa20.12■□□□□ 0.81
SMARCB1-204ENST00000407422 ST7Q9NRC1 585 aa20.12■□□□□ 0.81
SMARCB1-204ENST00000407422 STOML2Q9UJZ1 356 aa20.12■□□□□ 0.81
SMARCB1-204ENST00000407422 GFRA2O00451 464 aa20.11■□□□□ 0.81
SMARCB1-204ENST00000407422 LETM1O95202 739 aaPredicted RBP20.11■□□□□ 0.81
SMARCB1-204ENST00000407422 FYNP06241 537 aa20.11■□□□□ 0.81
SMARCB1-204ENST00000407422 HOXD9P28356 352 aaPredicted RBP20.11■□□□□ 0.81
SMARCB1-204ENST00000407422 LIMK1P53667 647 aa20.11■□□□□ 0.81
SMARCB1-204ENST00000407422 PIGKQ92643 395 aa20.11■□□□□ 0.81
SMARCB1-204ENST00000407422 STON1Q9Y6Q2 735 aa20.11■□□□□ 0.81
SMARCB1-204ENST00000407422 BECN2A8MW95 431 aa20.1■□□□□ 0.81
SMARCB1-204ENST00000407422 FBXO21O94952 628 aa20.1■□□□□ 0.81
SMARCB1-204ENST00000407422 IGLV3-27P01718 113 aa20.1■□□□□ 0.81
SMARCB1-204ENST00000407422 IL12RB1P42701 662 aa20.1■□□□□ 0.81
SMARCB1-204ENST00000407422 RPL34P49207 117 aaKnown RBP20.1■□□□□ 0.81
SMARCB1-204ENST00000407422 BYSLQ13895 437 aaKnown RBP20.1■□□□□ 0.81
SMARCB1-204ENST00000407422 ARHGAP44Q17R89 818 aa20.1■□□□□ 0.81
SMARCB1-204ENST00000407422 MPPE1Q53F39 396 aa20.1■□□□□ 0.81
SMARCB1-204ENST00000407422 ADGRF1Q5T601 910 aa20.1■□□□□ 0.81
SMARCB1-204ENST00000407422 TMEM215Q68D42 235 aa20.1■□□□□ 0.81
SMARCB1-204ENST00000407422 ANKS1BQ7Z6G8 1248 aa20.1■□□□□ 0.81
SMARCB1-204ENST00000407422 DEFB119Q8N690 84 aa20.1■□□□□ 0.81
SMARCB1-204ENST00000407422 ZNF606Q8WXB4 792 aa20.1■□□□□ 0.81
SMARCB1-204ENST00000407422 SORCS1Q8WY21 1168 aa20.1■□□□□ 0.81
SMARCB1-204ENST00000407422 CD93Q9NPY3 652 aa20.1■□□□□ 0.81
SMARCB1-204ENST00000407422 THAP10Q9P2Z0 257 aaPredicted RBP20.1■□□□□ 0.81
SMARCB1-204ENST00000407422 CYTH4Q9UIA0 394 aa20.1■□□□□ 0.81
SMARCB1-204ENST00000407422 LNP1A1A4G5 178 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 TM4SF5O14894 197 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 NCAM1P13591 858 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 SGSHP51688 502 aa20.09■□□□□ 0.81
SMARCB1-204ENST00000407422 DPCR1Q3MIW9 517 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms