RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 HNRNPCP07910 306 aaKnown RBP eCLIP7.18□□□□□ -1.26
PTPN12-202ENST00000407343 GALNSP34059 522 aa7.18□□□□□ -1.26
PTPN12-202ENST00000407343 ADD2P35612 726 aa7.18□□□□□ -1.26
PTPN12-202ENST00000407343 PTH2RP49190 550 aa7.18□□□□□ -1.26
PTPN12-202ENST00000407343 ARL4CP56559 192 aa7.18□□□□□ -1.26
PTPN12-202ENST00000407343 CFHR3Q02985 330 aa7.18□□□□□ -1.26
PTPN12-202ENST00000407343 PPFIA1Q13136 1202 aa7.18□□□□□ -1.26
PTPN12-202ENST00000407343 AAK1Q2M2I8 961 aa7.18□□□□□ -1.26
PTPN12-202ENST00000407343 GALNTL6Q49A17 601 aa7.18□□□□□ -1.26
PTPN12-202ENST00000407343 P3H2Q8IVL5 708 aa7.18□□□□□ -1.26
PTPN12-202ENST00000407343 HERC6Q8IVU3 1022 aa7.18□□□□□ -1.26
PTPN12-202ENST00000407343 TERB1Q8NA31 727 aa7.18□□□□□ -1.26
PTPN12-202ENST00000407343 SPPL3Q8TCT6 385 aa7.18□□□□□ -1.26
PTPN12-202ENST00000407343 SARAFQ96BY9 339 aa7.18□□□□□ -1.26
PTPN12-202ENST00000407343 PAGR1Q9BTK6 254 aa7.18□□□□□ -1.26
PTPN12-202ENST00000407343 SEMA4GQ9NTN9 838 aa7.18□□□□□ -1.26
PTPN12-202ENST00000407343 ASB6Q9NWX5 421 aa7.18□□□□□ -1.26
PTPN12-202ENST00000407343 TLK1Q9UKI8 766 aa7.18□□□□□ -1.26
PTPN12-202ENST00000407343 FAM90A20PA6NIJ5 464 aa7.17□□□□□ -1.26
PTPN12-202ENST00000407343 H3BNC9 293 aa7.17□□□□□ -1.26
PTPN12-202ENST00000407343 AKAP8O43823 692 aaKnown RBP7.17□□□□□ -1.26
PTPN12-202ENST00000407343 TXNL4AP83876 142 aaKnown RBP7.17□□□□□ -1.26
PTPN12-202ENST00000407343 SF3A3Q12874 501 aaKnown RBP eCLIP7.17□□□□□ -1.26
PTPN12-202ENST00000407343 ATPAF1Q5TC12 328 aaPredicted RBP7.17□□□□□ -1.26
PTPN12-202ENST00000407343 CEP85Q6P2H3 762 aa7.17□□□□□ -1.26
PTPN12-202ENST00000407343 RFX8Q6ZV50 586 aa7.17□□□□□ -1.26
PTPN12-202ENST00000407343 RAB11FIP2Q7L804 512 aa7.17□□□□□ -1.26
PTPN12-202ENST00000407343 ZNF804AQ7Z570 1209 aa7.17□□□□□ -1.26
PTPN12-202ENST00000407343 CAGE1Q8TC20 777 aa7.17□□□□□ -1.26
PTPN12-202ENST00000407343 GLMPQ8WWB7 406 aa7.17□□□□□ -1.26
PTPN12-202ENST00000407343 THAP4Q8WY91 577 aa7.17□□□□□ -1.26
PTPN12-202ENST00000407343 GCC1Q96CN9 775 aa7.17□□□□□ -1.26
PTPN12-202ENST00000407343 TRMT61AQ96FX7 289 aaKnown RBP7.17□□□□□ -1.26
PTPN12-202ENST00000407343 DUSP26Q9BV47 211 aa7.17□□□□□ -1.26
PTPN12-202ENST00000407343 CDCP1Q9H5V8 836 aa7.17□□□□□ -1.26
PTPN12-202ENST00000407343 ABHD10Q9NUJ1 306 aa7.17□□□□□ -1.26
PTPN12-202ENST00000407343 ARPP21Q9UBL0 812 aaPredicted RBP7.17□□□□□ -1.26
PTPN12-202ENST00000407343 FEM1BQ9UK73 627 aa7.17□□□□□ -1.26
PTPN12-202ENST00000407343 NFU1Q9UMS0 254 aa7.17□□□□□ -1.26
PTPN12-202ENST00000407343 C19orf53Q9UNZ5 99 aaPredicted RBP7.17□□□□□ -1.26
PTPN12-202ENST00000407343 UBE2J1Q9Y385 318 aaPredicted RBP7.17□□□□□ -1.26
PTPN12-202ENST00000407343 NKX2-8O15522 239 aa7.16□□□□□ -1.26
PTPN12-202ENST00000407343 NHLRC4P0CG21 123 aaPredicted RBP7.16□□□□□ -1.26
PTPN12-202ENST00000407343 IGHMBP2P38935 993 aaKnown RBP7.16□□□□□ -1.26
PTPN12-202ENST00000407343 SOX10P56693 466 aa7.16□□□□□ -1.26
PTPN12-202ENST00000407343 FOXL2P58012 376 aa7.16□□□□□ -1.26
PTPN12-202ENST00000407343 CCDC15Q0P6D6 951 aa7.16□□□□□ -1.26
PTPN12-202ENST00000407343 GAB1Q13480 694 aa7.16□□□□□ -1.26
PTPN12-202ENST00000407343 CUL4BQ13620 913 aa7.16□□□□□ -1.26
PTPN12-202ENST00000407343 P3H1Q32P28 736 aa7.16□□□□□ -1.26
PTPN12-202ENST00000407343 RRAGAQ7L523 313 aa7.16□□□□□ -1.26
PTPN12-202ENST00000407343 SLC29A4Q7RTT9 530 aa7.16□□□□□ -1.26
PTPN12-202ENST00000407343 AMIGO2Q86SJ2 522 aa7.16□□□□□ -1.26
PTPN12-202ENST00000407343 TTC30AQ86WT1 665 aa7.16□□□□□ -1.26
PTPN12-202ENST00000407343 CCDC117Q8IWD4 279 aaPredicted RBP7.16□□□□□ -1.26
PTPN12-202ENST00000407343 CPXCR1Q8N123 301 aa7.16□□□□□ -1.26
PTPN12-202ENST00000407343 MAFAQ8NHW3 353 aaPredicted RBP7.16□□□□□ -1.26
PTPN12-202ENST00000407343 CHFRQ96EP1 664 aa7.16□□□□□ -1.26
PTPN12-202ENST00000407343 SCLT1Q96NL6 688 aa7.16□□□□□ -1.26
PTPN12-202ENST00000407343 G6PC2Q9NQR9 355 aa7.16□□□□□ -1.26
PTPN12-202ENST00000407343 KAT6AQ92794 2004 aa7.15□□□□□ -1.26
PTPN12-202ENST00000407343 HMX3A6NHT5 357 aa7.15□□□□□ -1.26
PTPN12-202ENST00000407343 TARM1B6A8C7 271 aa7.15□□□□□ -1.26
PTPN12-202ENST00000407343 H7C1Q1 480 aa7.15□□□□□ -1.26
PTPN12-202ENST00000407343 HSD3B1P14060 373 aa7.15□□□□□ -1.26
PTPN12-202ENST00000407343 MMP8P22894 467 aa7.15□□□□□ -1.26
PTPN12-202ENST00000407343 THBS4P35443 961 aa7.15□□□□□ -1.26
PTPN12-202ENST00000407343 COPB1P53618 953 aaKnown RBP7.15□□□□□ -1.26
PTPN12-202ENST00000407343 RPL15P61313 204 aaKnown RBP7.15□□□□□ -1.26
PTPN12-202ENST00000407343 TRIM72Q6ZMU5 477 aa7.15□□□□□ -1.26
PTPN12-202ENST00000407343 OR52L2PQ8NGH6 319 aa7.15□□□□□ -1.26
PTPN12-202ENST00000407343 EVI5LQ96CN4 794 aa7.15□□□□□ -1.26
PTPN12-202ENST00000407343 TRAPPC9Q96Q05 1148 aa7.15□□□□□ -1.26
PTPN12-202ENST00000407343 FAM167BQ9BTA0 163 aa7.15□□□□□ -1.26
PTPN12-202ENST00000407343 ELAC1Q9H777 363 aaKnown RBP7.15□□□□□ -1.26
PTPN12-202ENST00000407343 USP29Q9HBJ7 922 aa7.15□□□□□ -1.26
PTPN12-202ENST00000407343 CPNE5Q9HCH3 593 aa7.15□□□□□ -1.26
PTPN12-202ENST00000407343 SAYSD1Q9NPB0 183 aa7.15□□□□□ -1.26
PTPN12-202ENST00000407343 FBXO28Q9NVF7 368 aa7.15□□□□□ -1.26
PTPN12-202ENST00000407343 KIF17Q9P2E2 1029 aa7.15□□□□□ -1.26
PTPN12-202ENST00000407343 COL11A2P13942 1736 aaPredicted RBP7.15□□□□□ -1.27
PTPN12-202ENST00000407343 C16orf96A6NNT2 1141 aa7.14□□□□□ -1.27
PTPN12-202ENST00000407343 EXOC3O60645 756 aa7.14□□□□□ -1.27
PTPN12-202ENST00000407343 HEXIM1O94992 359 aaKnown RBP7.14□□□□□ -1.27
PTPN12-202ENST00000407343 LARGE1O95461 756 aa7.14□□□□□ -1.27
PTPN12-202ENST00000407343 MT-CO3P00414 261 aa7.14□□□□□ -1.27
PTPN12-202ENST00000407343 PEPDP12955 493 aa7.14□□□□□ -1.27
PTPN12-202ENST00000407343 ZNF37AP17032 561 aaPredicted RBP7.14□□□□□ -1.27
PTPN12-202ENST00000407343 HOXA4Q00056 320 aaPredicted RBP7.14□□□□□ -1.27
PTPN12-202ENST00000407343 SMAD1Q15797 465 aaKnown RBP7.14□□□□□ -1.27
PTPN12-202ENST00000407343 DENND2CQ68D51 928 aa7.14□□□□□ -1.27
PTPN12-202ENST00000407343 CYP26C1Q6V0L0 522 aa7.14□□□□□ -1.27
PTPN12-202ENST00000407343 KYAT3Q6YP21 454 aaKnown RBP7.14□□□□□ -1.27
PTPN12-202ENST00000407343 OR6Y1Q8NGX8 325 aa7.14□□□□□ -1.27
PTPN12-202ENST00000407343 CSGALNACT1Q8TDX6 532 aa7.14□□□□□ -1.27
PTPN12-202ENST00000407343 PPM1EQ8WY54 764 aa7.14□□□□□ -1.27
PTPN12-202ENST00000407343 ELOVL1Q9BW60 279 aa7.14□□□□□ -1.27
PTPN12-202ENST00000407343 CINPQ9BW66 212 aaPredicted RBP7.14□□□□□ -1.27
PTPN12-202ENST00000407343 RCE1Q9Y256 329 aa7.14□□□□□ -1.27
PTPN12-202ENST00000407343 AOX1Q06278 1338 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms