RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 FAM90A20PA6NIJ5 464 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 C3orf70A6NLC5 250 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TBC1D3LB9A6J9 549 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 STX16-NPEPL1H3BU86 382 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 STX16O14662 325 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 ANP32CO43423 234 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TBC1D3HP0C7X1 549 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 ATP1A3P13637 1013 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 MATN1P21941 496 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 CHMP24386 653 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 GKP32189 559 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 GRK5P34947 590 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TUBP50607 506 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 NR1H2P55055 460 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 BLOC1S1P78537 153 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TXNL4AP83876 142 aaKnown RBP5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TLE3Q04726 772 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 GOLGA8FQ08AF8 430 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 EIF2B5Q13144 721 aaKnown RBP5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 PDCLQ13371 301 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TBCCQ15814 346 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 BAK1Q16611 211 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 LY6KQ17RY6 165 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 AAK1Q2M2I8 961 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 NBPF8Q3BBV2 869 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 PLAC9Q5JTB6 97 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 WDR45BQ5MNZ6 344 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TMEM63BQ5T3F8 832 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 ANKRD40Q6AI12 368 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TBC1D3GQ6DHY5 549 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TBC1D3CQ6IPX1 549 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 ACAD10Q6JQN1 1059 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 DBX2Q6ZNG2 339 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 ARMC8Q8IUR7 673 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TBC1D3Q8IZP1 549 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 OR4N4Q8N0Y3 316 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 LNX2Q8N448 690 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 ZNF276Q8N554 614 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TTC9BQ8N6N2 239 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 METTL25Q8N6Q8 603 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 SIRT6Q8N6T7 355 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 PTGR2Q8N8N7 351 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 CCDC89Q8N998 374 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TOR1AIP2Q8NFQ8 470 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 RP9Q8TA86 221 aaKnown RBP5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 SSH3Q8TE77 659 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 SLC25A43Q8WUT9 341 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 XAGE5Q8WWM1 108 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 R3HDM4Q96D70 268 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TIGD1Q96MW7 591 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TREX2Q9BQ50 279 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 PAIP1Q9H074 479 aaKnown RBP5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 PDCL3Q9H2J4 239 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 SYNPO2LQ9H987 977 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 ALG13Q9NP73 1137 aaKnown RBP5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 PARD6AQ9NPB6 346 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 KLC4Q9NSK0 619 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 TESQ9UGI8 421 aaKnown RBP5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 CNOT11Q9UKZ1 510 aaKnown RBP5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 GDAQ9Y2T3 454 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 PCDHB7Q9Y5E2 793 aa5.29□□□□□ -1.56
HMGB3P18-201ENST00000406327 FANCD2Q9BXW9 1451 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 TMEM200CA6NKL6 621 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 K7ENM7 598 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 NKX2-8O15522 239 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 KLK10O43240 276 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 ZBED4O75132 1171 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 PMPCBO75439 489 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 RTN3O95197 1032 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 FESP07332 822 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 CPA1P15085 419 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 CREB1P16220 341 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 ARL1P40616 181 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 PNPLA4P41247 253 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 GPD2P43304 727 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 CASP6P55212 293 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 FAM189BP81408 668 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 BMPR2Q13873 1038 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 DCTN1Q14203 1278 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 KCTD2Q14681 263 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 TIGD2Q4W5G0 525 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 TREML2Q5T2D2 321 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 SPATA1Q5VX52 437 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 LIPMQ5VYY2 423 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 WDR93Q6P2C0 686 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 DENND1BQ6P3S1 775 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 CFAP161Q6P656 301 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 VWA1Q6PCB0 445 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 BRINP3Q76B58 766 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 PNPLA1Q8N8W4 532 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 FAM71DQ8N9W8 422 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 CHST13Q8NET6 341 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 MYCBPAPQ8TBZ2 947 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 ADAMTS15Q8TE58 950 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 LPIN2Q92539 896 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 CENPIQ92674 756 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 ZUFSPQ96AP4 578 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 SH3KBP1Q96B97 665 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 PPP1R10Q96QC0 940 aaKnown RBP5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 CDK5RAP1Q96SZ6 601 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms