RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 LMO2P25791 158 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 TKTP29401 623 aaKnown RBP10.19□□□□□ -0.78
MSH2-202ENST00000406134 GBP2P32456 591 aaPredicted RBP10.19□□□□□ -0.78
MSH2-202ENST00000406134 CPOXP36551 454 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 PTPN9P43378 593 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 TNFAIP2Q03169 654 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 TFDP2Q14188 446 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 TIFABQ6ZNK6 161 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 RNF169Q8NCN4 708 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 ARMC2Q8NEN0 867 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 PPTC7Q8NI37 304 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 NSL1Q96IY1 281 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 MTO1Q9Y2Z2 717 aaKnown RBP10.19□□□□□ -0.78
MSH2-202ENST00000406134 NUP205Q92621 2012 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 H0Y3Z8 333 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 ITM2AO43736 263 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 TBX10O75333 385 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 GPR32O75388 356 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 INHBAP08476 426 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 FGF3P11487 239 aaPredicted RBP10.19□□□□□ -0.78
MSH2-202ENST00000406134 CCDC130P13994 396 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 ALDH3A1P30838 453 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 BAG6P46379 1132 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 BOLA3Q53S33 107 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 RABGAP1LQ5R372 815 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 FYB2Q5VWT5 728 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 MBLAC2Q68D91 279 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 OR6Y1Q8NGX8 325 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 RNF217Q8TC41 542 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 NMRK1Q9NWW6 199 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 HBS1LQ9Y450 684 aaKnown RBP10.19□□□□□ -0.78
MSH2-202ENST00000406134 HES2Q9Y543 173 aa10.19□□□□□ -0.78
MSH2-202ENST00000406134 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.19□□□□□ -0.78
MSH2-202ENST00000406134 DDNO94850 711 aaPredicted RBP10.18□□□□□ -0.78
MSH2-202ENST00000406134 TROVE2P10155 538 aaKnown RBP eCLIP10.18□□□□□ -0.78
MSH2-202ENST00000406134 ATP6V1C1P21283 382 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 CRHR1P34998 444 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 BCAR1P56945 870 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 CRADDP78560 199 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 RBP5P82980 135 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 ARHGAP17Q68EM7 881 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 ARCQ7LC44 396 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 PPP1R13LQ8WUF5 828 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 NDRG1Q92597 394 aaKnown RBP10.18□□□□□ -0.78
MSH2-202ENST00000406134 RSRC1Q96IZ7 334 aaKnown RBP10.18□□□□□ -0.78
MSH2-202ENST00000406134 TBCBQ99426 244 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 SORT1Q99523 831 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 NGRNQ9NPE2 291 aaKnown RBP10.18□□□□□ -0.78
MSH2-202ENST00000406134 COL1A2P08123 1366 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 CCDC195A0A1B0GUA6 201 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 LIN7AO14910 233 aaPredicted RBP10.18□□□□□ -0.78
MSH2-202ENST00000406134 SNAI1O95863 264 aaPredicted RBP10.18□□□□□ -0.78
MSH2-202ENST00000406134 BPGMP07738 259 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 SNRPAP09012 282 aaKnown RBP10.18□□□□□ -0.78
MSH2-202ENST00000406134 CD1EP15812 388 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 GOT1P17174 413 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 RAP1GDS1P52306 607 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 OLIG2Q13516 323 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 KRT81Q14533 505 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 KCNT2Q6UVM3 1135 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 ZCCHC23Q6ZST2 131 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 SLC26A9Q7LBE3 791 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 GSDMBQ8TAX9 411 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 KIF12Q96FN5 646 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 MCMBPQ9BTE3 642 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 KRT82Q9NSB4 513 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 KIAA1257Q9ULG3 409 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 SDR42E2A6NKP2 422 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 EIF4E1BA6NMX2 242 aaKnown RBP10.18□□□□□ -0.78
MSH2-202ENST00000406134 MFSD11O43934 449 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 CCDC22O60826 627 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 CSRP3P50461 194 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 RNF111Q6ZNA4 994 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 PHC3Q8NDX5 983 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 NT5C3BQ969T7 300 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 LRRC39Q96DD0 335 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 IFT43Q96FT9 208 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 PIH1D1Q9NWS0 290 aaKnown RBP10.18□□□□□ -0.78
MSH2-202ENST00000406134 SNTG2Q9NY99 539 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 KCNK4Q9NYG8 393 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 IL1RAPL1Q9NZN1 696 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 PPP1R1BQ9UD71 204 aaPredicted RBP10.18□□□□□ -0.78
MSH2-202ENST00000406134 WASF2Q9Y6W5 498 aa10.18□□□□□ -0.78
MSH2-202ENST00000406134 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.18□□□□□ -0.78
MSH2-202ENST00000406134 COPEO14579 308 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 HNRNPCL1O60812 293 aaKnown RBP10.17□□□□□ -0.78
MSH2-202ENST00000406134 ZBED1O96006 694 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 F7P08709 466 aaPredicted RBP10.17□□□□□ -0.78
MSH2-202ENST00000406134 ADCYAP1R1P41586 468 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 CPA2P48052 419 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 TTLL4Q14679 1199 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 PCLAFQ15004 111 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 CHI3L2Q15782 390 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 ARTNQ5T4W7 220 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 SCYL2Q6P3W7 929 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 CYS1Q717R9 158 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 ERO1BQ86YB8 467 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 RBM15BQ8NDT2 890 aaKnown RBP10.17□□□□□ -0.78
MSH2-202ENST00000406134 CLPTM1LQ96KA5 538 aa10.17□□□□□ -0.78
MSH2-202ENST00000406134 ANKRD27Q96NW4 1050 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms