RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ANKS1BQ7Z6G8 1248 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 RFX6Q8HWS3 928 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 MRPL43Q8N983 215 aaKnown RBP21.82■■□□□ 1.08
TPM1-208ENST00000404484 C1orf54Q8WWF1 131 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 PPP2R3CQ969Q6 453 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 NTAN1Q96AB6 310 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 RAB6CQ9H0N0 254 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 EPB41L5Q9HCM4 733 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 WDR27A2RRH5 827 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 LINC01565O15544 149 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 ECEL1O95672 775 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 CXCL14O95715 111 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 GAS8O95995 478 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 YWHAQP27348 245 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 LTBRP36941 435 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 MRPS25P82663 173 aaKnown RBP21.82■■□□□ 1.08
TPM1-208ENST00000404484 IFRD2Q12894 506 aaPredicted RBP21.82■■□□□ 1.08
TPM1-208ENST00000404484 NME3Q13232 169 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 CUL1Q13616 776 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 CCNI2Q6ZMN8 369 aaPredicted RBP21.82■■□□□ 1.08
TPM1-208ENST00000404484 EP400NLQ6ZTU2 488 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 FAM131BQ86XD5 332 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 JAMLQ86YT9 394 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.82■■□□□ 1.08
TPM1-208ENST00000404484 AUTS2Q8WXX7 1259 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.82■■□□□ 1.08
TPM1-208ENST00000404484 ASB2Q96Q27 587 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 ADAM33Q9BZ11 813 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 ZBP1Q9H171 429 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 PRDM16Q9HAZ2 1276 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 PCDH18Q9HCL0 1135 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 DDIT4Q9NX09 232 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 CLDND1Q9NY35 253 aa21.82■■□□□ 1.08
TPM1-208ENST00000404484 RCOR3Q9P2K3 495 aaPredicted RBP21.82■■□□□ 1.08
TPM1-208ENST00000404484 TTC28Q96AY4 2481 aa21.81■■□□□ 1.08
TPM1-208ENST00000404484 FAM92AA1XBS5 289 aa21.81■■□□□ 1.08
TPM1-208ENST00000404484 C2orf71A6NGG8 1288 aa21.81■■□□□ 1.08
TPM1-208ENST00000404484 C2CD2LO14523 706 aa21.81■■□□□ 1.08
TPM1-208ENST00000404484 CST8O60676 142 aa21.81■■□□□ 1.08
TPM1-208ENST00000404484 CD48P09326 243 aa21.81■■□□□ 1.08
TPM1-208ENST00000404484 KCNA5P22460 613 aa21.81■■□□□ 1.08
TPM1-208ENST00000404484 PSEN1P49768 467 aa21.81■■□□□ 1.08
TPM1-208ENST00000404484 DUSP4Q13115 394 aa21.81■■□□□ 1.08
TPM1-208ENST00000404484 ADAM15Q13444 863 aa21.81■■□□□ 1.08
TPM1-208ENST00000404484 ARL13BQ3SXY8 428 aa21.81■■□□□ 1.08
TPM1-208ENST00000404484 EFHC2Q5JST6 749 aa21.81■■□□□ 1.08
TPM1-208ENST00000404484 TTC27Q6P3X3 843 aa21.81■■□□□ 1.08
TPM1-208ENST00000404484 ATL2Q8NHH9 583 aa21.81■■□□□ 1.08
TPM1-208ENST00000404484 EDEM1Q92611 657 aa21.81■■□□□ 1.08
TPM1-208ENST00000404484 DHX35Q9H5Z1 703 aaKnown RBP21.81■■□□□ 1.08
TPM1-208ENST00000404484 MRPL17Q9NRX2 175 aaKnown RBP21.81■■□□□ 1.08
TPM1-208ENST00000404484 FZD10Q9ULW2 581 aa21.81■■□□□ 1.08
TPM1-208ENST00000404484 MAFFQ9ULX9 164 aa21.81■■□□□ 1.08
TPM1-208ENST00000404484 SLC27A5Q9Y2P5 690 aa21.81■■□□□ 1.08
TPM1-208ENST00000404484 PLXNA3P51805 1871 aa21.8■■□□□ 1.08
TPM1-208ENST00000404484 ZMYND10O75800 440 aa21.8■■□□□ 1.08
TPM1-208ENST00000404484 VNN2O95498 520 aa21.8■■□□□ 1.08
TPM1-208ENST00000404484 CTSAP10619 480 aa21.8■■□□□ 1.08
TPM1-208ENST00000404484 PTGIRP43119 386 aa21.8■■□□□ 1.08
TPM1-208ENST00000404484 GPR15P49685 360 aa21.8■■□□□ 1.08
TPM1-208ENST00000404484 ATXN1P54253 815 aaKnown RBP21.8■■□□□ 1.08
TPM1-208ENST00000404484 DLX2Q07687 328 aaPredicted RBP21.8■■□□□ 1.08
TPM1-208ENST00000404484 ZC3H12AQ5D1E8 599 aaKnown RBP21.8■■□□□ 1.08
TPM1-208ENST00000404484 TTC9BQ8N6N2 239 aa21.8■■□□□ 1.08
TPM1-208ENST00000404484 CCDC185Q8N715 623 aa21.8■■□□□ 1.08
TPM1-208ENST00000404484 ZNF461Q8TAF7 563 aa21.8■■□□□ 1.08
TPM1-208ENST00000404484 RNF139Q8WU17 664 aa21.8■■□□□ 1.08
TPM1-208ENST00000404484 RNF157Q96PX1 679 aa21.8■■□□□ 1.08
TPM1-208ENST00000404484 CLSTN3Q9BQT9 956 aa21.8■■□□□ 1.08
TPM1-208ENST00000404484 ERP44Q9BS26 406 aa21.8■■□□□ 1.08
TPM1-208ENST00000404484 FAM114A2Q9NRY5 505 aa21.8■■□□□ 1.08
TPM1-208ENST00000404484 PIGVQ9NUD9 493 aa21.8■■□□□ 1.08
TPM1-208ENST00000404484 GPATCH2LQ9NWQ4 482 aa21.8■■□□□ 1.08
TPM1-208ENST00000404484 R3HDM2Q9Y2K5 976 aaKnown RBP21.8■■□□□ 1.08
TPM1-208ENST00000404484 MYO16Q9Y6X6 1858 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 SYNJ2BP-COX16A0A087WUM0 186 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 BHMG1C9JSJ3 638 aaPredicted RBP21.79■■□□□ 1.08
TPM1-208ENST00000404484 APOC4-APOC2K7ER74 178 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 ADAM12O43184 909 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 APOC2P02655 101 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 ZFXP17010 805 aaPredicted RBP21.79■■□□□ 1.08
TPM1-208ENST00000404484 RPL17P18621 184 aaKnown RBP21.79■■□□□ 1.08
TPM1-208ENST00000404484 L1CAMP32004 1257 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 ARL4AP40617 200 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 KCNQ1P51787 676 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 ZNF135P52742 658 aaPredicted RBP21.79■■□□□ 1.08
TPM1-208ENST00000404484 PITX1P78337 314 aaPredicted RBP21.79■■□□□ 1.08
TPM1-208ENST00000404484 SCAPQ12770 1279 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 SNX1Q13596 522 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 RAB33AQ14088 237 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 DUSP6Q16828 381 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 SDHAF4Q5VUM1 108 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 EFHBQ8N7U6 833 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 DQX1Q8TE96 717 aaKnown RBP21.79■■□□□ 1.08
TPM1-208ENST00000404484 ATG4AQ8WYN0 398 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 SEC14L1Q92503 715 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 FBXO32Q969P5 355 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 FAF2Q96CS3 445 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 SMOC2Q9H3U7 446 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms