RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 C2orf40Q9H1Z8 148 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 C1orf21Q9H246 121 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 SMYD2Q9NRG4 433 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 PAPOLBQ9NRJ5 636 aaKnown RBP20.51■□□□□ 0.87
CCDC47-202ENST00000403162 HBS1LQ9Y450 684 aaKnown RBP20.51■□□□□ 0.87
CCDC47-202ENST00000403162 BCLAF3A2AJT9 711 aaKnown RBP20.51■□□□□ 0.87
CCDC47-202ENST00000403162 C2CD4BA6NLJ0 364 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 GAS2O43903 313 aaKnown RBP20.51■□□□□ 0.87
CCDC47-202ENST00000403162 SRGAP2CP0DJJ0 459 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 ANPEPP15144 967 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 CRHR1P34998 444 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 ACTR3P61158 418 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 ORC1Q13415 861 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 GJC2Q5T442 439 aaPredicted RBP20.51■□□□□ 0.87
CCDC47-202ENST00000403162 RIPOR1Q6ZS17 1223 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 ULK2Q8IYT8 1036 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 RNF149Q8NC42 400 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 NR1H4Q96RI1 486 aaPredicted RBP20.51■□□□□ 0.87
CCDC47-202ENST00000403162 LBHD1Q9BQE6 289 aaPredicted RBP20.51■□□□□ 0.87
CCDC47-202ENST00000403162 ELOVL4Q9GZR5 314 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 ETNK2Q9NVF9 386 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 M0QYV0 167 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 CILPO75339 1184 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 IL18RAPO95256 599 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 HMGCRP04035 888 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 SERPINA6P08185 405 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 KRT19P08727 400 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 GNAT1P11488 350 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 MAGEA3P43357 314 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 AQP5P55064 265 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 WASHC5Q12768 1159 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 PDK2Q15119 407 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 SH3PXD2AQ5TCZ1 1133 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 ARCQ7LC44 396 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 MAP7D3Q8IWC1 876 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 TMEM176AQ96HP8 235 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 FAM167AQ96KS9 214 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 SPATA33Q96N06 139 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 PANX3Q96QZ0 392 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 SLC13A1Q9BZW2 595 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 GPAMQ9HCL2 828 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 SAGE1Q9NXZ1 904 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 HMGXB4Q9UGU5 601 aa20.5■□□□□ 0.87
CCDC47-202ENST00000403162 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.49■□□□□ 0.87
CCDC47-202ENST00000403162 NOP56O00567 594 aaKnown RBP20.49■□□□□ 0.87
CCDC47-202ENST00000403162 PRPSAP2O60256 369 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 BPGMP07738 259 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 CACNA2D1P54289 1103 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 DBN1Q16643 649 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 TRNP1Q6NT89 227 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 KYAT3Q6YP21 454 aaKnown RBP20.49■□□□□ 0.87
CCDC47-202ENST00000403162 UNC5AQ6ZN44 842 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 MFN1Q8IWA4 741 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 RXFP2Q8WXD0 754 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 ZBTB10Q96DT7 871 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 SMYD3Q9H7B4 428 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 SORCS3Q9UPU3 1222 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 C2CD2Q9Y426 696 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 KAT6AQ92794 2004 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 CCDC195A0A1B0GUA6 201 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 FAM159BA6NKW6 160 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 CYB561D2O14569 222 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 ZBED1O96006 694 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 CSH1P0DML2 217 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 CSH2P0DML3 217 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 RBL1P28749 1068 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 AP2B1P63010 937 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 ROR2Q01974 943 aaKnown RBP20.49■□□□□ 0.87
CCDC47-202ENST00000403162 BMPR2Q13873 1038 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 KRT81Q14533 505 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 ATF7IP2Q5U623 682 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 RNF220Q5VTB9 566 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 C4orf22Q6V702 233 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 GALNT15Q8N3T1 639 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 ZFAND2BQ8WV99 257 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 SEPT1Q8WYJ6 367 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 SIKE1Q9BRV8 207 aa20.49■□□□□ 0.87
CCDC47-202ENST00000403162 APOL1O14791 398 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 UGT1A9O60656 530 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 APRTP07741 180 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 PDGFRAP16234 1089 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 IL4RP24394 825 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 SERPINB9P50453 376 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 KDSRQ06136 332 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 HSDL1Q3SXM5 330 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 CWF19L1Q69YN2 538 aaKnown RBP20.48■□□□□ 0.87
CCDC47-202ENST00000403162 SLC9A4Q6AI14 798 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 IQSEC1Q6DN90 963 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 PQLC3Q8N755 202 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 C1orf127Q8N9H9 656 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 GSDMBQ8TAX9 411 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 ZNF395Q9H8N7 513 aaPredicted RBP20.48■□□□□ 0.87
CCDC47-202ENST00000403162 UGT1A7Q9HAW7 530 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 UGT1A10Q9HAW8 530 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 UGT1A8Q9HAW9 530 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 PDP2Q9P2J9 529 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 SLC7A8Q9UHI5 535 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 IGKV6-21A0A0C4DH24 114 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 HMX2A2RU54 273 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 ACKR2O00590 384 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms