RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 PGAP3Q96FM1 320 aaPredicted RBP16.61■□□□□ 0.25
HMGA1-204ENST00000401473 KXD1Q9BQD3 176 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 KCNK12Q9HB15 430 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 TLR6Q9Y2C9 796 aa16.61■□□□□ 0.25
HMGA1-204ENST00000401473 I6L893 689 aaPredicted RBP16.6■□□□□ 0.25
HMGA1-204ENST00000401473 IGLV3-27P01718 113 aa16.6■□□□□ 0.25
HMGA1-204ENST00000401473 IRF1P10914 325 aa16.6■□□□□ 0.25
HMGA1-204ENST00000401473 PTPN9P43378 593 aa16.6■□□□□ 0.25
HMGA1-204ENST00000401473 SULT1E1P49888 294 aa16.6■□□□□ 0.25
HMGA1-204ENST00000401473 HDAC4P56524 1084 aa16.6■□□□□ 0.25
HMGA1-204ENST00000401473 TRIP4Q15650 581 aaPredicted RBP16.6■□□□□ 0.25
HMGA1-204ENST00000401473 ZC3H12AQ5D1E8 599 aaKnown RBP16.6■□□□□ 0.25
HMGA1-204ENST00000401473 DAB2IPQ5VWQ8 1189 aa16.6■□□□□ 0.25
HMGA1-204ENST00000401473 ZNF564Q8TBZ8 553 aaPredicted RBP16.6■□□□□ 0.25
HMGA1-204ENST00000401473 FNIP1Q8TF40 1166 aa16.6■□□□□ 0.25
HMGA1-204ENST00000401473 RFFLQ8WZ73 363 aa16.6■□□□□ 0.25
HMGA1-204ENST00000401473 ELSPBP1Q96BH3 223 aa16.6■□□□□ 0.25
HMGA1-204ENST00000401473 SERPINB11Q96P15 392 aa16.6■□□□□ 0.25
HMGA1-204ENST00000401473 ANLNQ9NQW6 1124 aa16.6■□□□□ 0.25
HMGA1-204ENST00000401473 RRN3Q9NYV6 651 aa16.6■□□□□ 0.25
HMGA1-204ENST00000401473 CFAP97Q9P2B7 532 aa16.6■□□□□ 0.25
HMGA1-204ENST00000401473 UVRAGQ9P2Y5 699 aa16.6■□□□□ 0.25
HMGA1-204ENST00000401473 TRIM10Q9UDY6 481 aa16.6■□□□□ 0.25
HMGA1-204ENST00000401473 ANAPC7Q9UJX3 599 aa16.6■□□□□ 0.25
HMGA1-204ENST00000401473 STAP1Q9ULZ2 295 aa16.6■□□□□ 0.25
HMGA1-204ENST00000401473 PJA2O43164 708 aa16.59■□□□□ 0.25
HMGA1-204ENST00000401473 CCP110O43303 1012 aa16.59■□□□□ 0.25
HMGA1-204ENST00000401473 TCEAL1Q15170 157 aa16.59■□□□□ 0.25
HMGA1-204ENST00000401473 GJD3Q8N144 294 aa16.59■□□□□ 0.25
HMGA1-204ENST00000401473 FAM172AQ8WUF8 416 aa16.59■□□□□ 0.25
HMGA1-204ENST00000401473 FCRL2Q96LA5 508 aaPredicted RBP16.59■□□□□ 0.25
HMGA1-204ENST00000401473 CNPY3Q9BT09 278 aa16.59■□□□□ 0.25
HMGA1-204ENST00000401473 LINC00597Q9H2U6 94 aa16.59■□□□□ 0.25
HMGA1-204ENST00000401473 HBS1LQ9Y450 684 aaKnown RBP16.59■□□□□ 0.25
HMGA1-204ENST00000401473 DPYSL4O14531 572 aa16.59■□□□□ 0.25
HMGA1-204ENST00000401473 TCF3P15923 654 aa16.59■□□□□ 0.25
HMGA1-204ENST00000401473 TBX4P57082 545 aa16.59■□□□□ 0.25
HMGA1-204ENST00000401473 HTR3DQ70Z44 454 aa16.59■□□□□ 0.25
HMGA1-204ENST00000401473 CPNE8Q86YQ8 564 aa16.59■□□□□ 0.25
HMGA1-204ENST00000401473 MFSD6LQ8IWD5 586 aa16.59■□□□□ 0.25
HMGA1-204ENST00000401473 RHOT2Q8IXI1 618 aa16.59■□□□□ 0.25
HMGA1-204ENST00000401473 BPIFB1Q8TDL5 484 aa16.59■□□□□ 0.25
HMGA1-204ENST00000401473 FAM204AQ9H8W3 233 aa16.59■□□□□ 0.25
HMGA1-204ENST00000401473 LUC7LQ9NQ29 371 aaKnown RBP16.59■□□□□ 0.25
HMGA1-204ENST00000401473 TMPRSS4Q9NRS4 437 aa16.59■□□□□ 0.25
HMGA1-204ENST00000401473 XPO7Q9UIA9 1087 aaKnown RBP16.59■□□□□ 0.25
HMGA1-204ENST00000401473 MYO1FO00160 1098 aa16.58■□□□□ 0.24
HMGA1-204ENST00000401473 ECI2O75521 394 aa16.58■□□□□ 0.24
HMGA1-204ENST00000401473 MTA2O94776 668 aa16.58■□□□□ 0.24
HMGA1-204ENST00000401473 PSMA2P25787 234 aa16.58■□□□□ 0.24
HMGA1-204ENST00000401473 GBP1P32455 592 aa16.58■□□□□ 0.24
HMGA1-204ENST00000401473 CXCR3P49682 368 aa16.58■□□□□ 0.24
HMGA1-204ENST00000401473 DEUP1Q05D60 604 aa16.58■□□□□ 0.24
HMGA1-204ENST00000401473 RING1Q06587 406 aa16.58■□□□□ 0.24
HMGA1-204ENST00000401473 FCHO2Q0JRZ9 810 aa16.58■□□□□ 0.24
HMGA1-204ENST00000401473 USP4Q13107 963 aa16.58■□□□□ 0.24
HMGA1-204ENST00000401473 NNTQ13423 1086 aa16.58■□□□□ 0.24
HMGA1-204ENST00000401473 GRM2Q14416 872 aa16.58■□□□□ 0.24
HMGA1-204ENST00000401473 MTSS1LQ765P7 747 aa16.58■□□□□ 0.24
HMGA1-204ENST00000401473 STRADAQ7RTN6 431 aa16.58■□□□□ 0.24
HMGA1-204ENST00000401473 KIAA1328Q86T90 577 aa16.58■□□□□ 0.24
HMGA1-204ENST00000401473 SLC44A3Q8N4M1 653 aa16.58■□□□□ 0.24
HMGA1-204ENST00000401473 ASIC4Q96FT7 647 aa16.58■□□□□ 0.24
HMGA1-204ENST00000401473 ZFYVE19Q96K21 471 aa16.58■□□□□ 0.24
HMGA1-204ENST00000401473 OBP2AQ9NY56 170 aa16.58■□□□□ 0.24
HMGA1-204ENST00000401473 KCNU1A8MYU2 1149 aa16.57■□□□□ 0.24
HMGA1-204ENST00000401473 NRDCO43847 1150 aa16.57■□□□□ 0.24
HMGA1-204ENST00000401473 F9P00740 461 aa16.57■□□□□ 0.24
HMGA1-204ENST00000401473 CORO1AP31146 461 aaKnown RBP16.57■□□□□ 0.24
HMGA1-204ENST00000401473 KPNA1P52294 538 aaPredicted RBP16.57■□□□□ 0.24
HMGA1-204ENST00000401473 Q6ZNB5 142 aa16.57■□□□□ 0.24
HMGA1-204ENST00000401473 FAM131BQ86XD5 332 aa16.57■□□□□ 0.24
HMGA1-204ENST00000401473 RNF135Q8IUD6 432 aa16.57■□□□□ 0.24
HMGA1-204ENST00000401473 DENND1CQ8IV53 801 aa16.57■□□□□ 0.24
HMGA1-204ENST00000401473 BBS7Q8IWZ6 715 aa16.57■□□□□ 0.24
HMGA1-204ENST00000401473 UHRF1Q96T88 793 aaPredicted RBP16.57■□□□□ 0.24
HMGA1-204ENST00000401473 MAGEB5Q9BZ81 275 aa16.57■□□□□ 0.24
HMGA1-204ENST00000401473 WDCPQ9H6R7 721 aa16.57■□□□□ 0.24
HMGA1-204ENST00000401473 KIF9Q9HAQ2 790 aa16.57■□□□□ 0.24
HMGA1-204ENST00000401473 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.57■□□□□ 0.24
HMGA1-204ENST00000401473 AGO1Q9UL18 857 aaKnown RBP16.57■□□□□ 0.24
HMGA1-204ENST00000401473 A0A0A6YYK5 440 aaPredicted RBP16.56■□□□□ 0.24
HMGA1-204ENST00000401473 E2F8A0AVK6 867 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 BUB1O43683 1085 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 TCF4P15884 667 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 PSMC3P17980 439 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 CCR1P32246 355 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 RDXP35241 583 aaKnown RBP16.56■□□□□ 0.24
HMGA1-204ENST00000401473 NOP2P46087 812 aaKnown RBP16.56■□□□□ 0.24
HMGA1-204ENST00000401473 KIF5AQ12840 1032 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 ADGRG2Q8IZP9 1017 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 E2F7Q96AV8 911 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 PLD4Q96BZ4 506 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 IP6K2Q9UHH9 426 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 PYCARDQ9ULZ3 195 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 PPP2R2CQ9Y2T4 447 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 SH3BP1Q9Y3L3 701 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 BTNL10A8MVZ5 291 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 LRCH4O75427 683 aa16.56■□□□□ 0.24
HMGA1-204ENST00000401473 CCDC175P0C221 793 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms