RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 GBE1Q04446 702 aa12.15□□□□□ -0.46
SKA3-203ENST00000400018 DPYSL3Q14195 570 aa12.15□□□□□ -0.46
SKA3-203ENST00000400018 UBAP2Q5T6F2 1119 aaKnown RBP12.15□□□□□ -0.46
SKA3-203ENST00000400018 PM20D1Q6GTS8 502 aa12.15□□□□□ -0.46
SKA3-203ENST00000400018 RFWD3Q6PCD5 774 aa12.15□□□□□ -0.46
SKA3-203ENST00000400018 CFAP52Q8N1V2 620 aa12.15□□□□□ -0.46
SKA3-203ENST00000400018 IFT81Q8WYA0 676 aa12.15□□□□□ -0.46
SKA3-203ENST00000400018 MAGOHBQ96A72 148 aaKnown RBP12.15□□□□□ -0.46
SKA3-203ENST00000400018 CELF6Q96J87 481 aaKnown RBP12.15□□□□□ -0.46
SKA3-203ENST00000400018 TMEM121Q9BTD3 319 aa12.15□□□□□ -0.46
SKA3-203ENST00000400018 PARD6BQ9BYG5 372 aa12.15□□□□□ -0.46
SKA3-203ENST00000400018 TLR9Q9NR96 1032 aa12.15□□□□□ -0.46
SKA3-203ENST00000400018 CWC15Q9P013 229 aaKnown RBP12.15□□□□□ -0.46
SKA3-203ENST00000400018 INSL5Q9Y5Q6 135 aa12.15□□□□□ -0.46
SKA3-203ENST00000400018 MYO18AQ92614 2054 aaKnown RBP12.15□□□□□ -0.46
SKA3-203ENST00000400018 MYOFQ9NZM1 2061 aa12.15□□□□□ -0.46
SKA3-203ENST00000400018 EFCAB14O75071 495 aa12.15□□□□□ -0.47
SKA3-203ENST00000400018 C8AP07357 584 aa12.15□□□□□ -0.47
SKA3-203ENST00000400018 NOS2P35228 1153 aa12.15□□□□□ -0.47
SKA3-203ENST00000400018 SLC10A2Q12908 348 aaPredicted RBP12.15□□□□□ -0.47
SKA3-203ENST00000400018 GPM6BQ13491 265 aa12.15□□□□□ -0.47
SKA3-203ENST00000400018 TCEAL1Q15170 157 aa12.15□□□□□ -0.47
SKA3-203ENST00000400018 TMC5Q6UXY8 1006 aa12.15□□□□□ -0.47
SKA3-203ENST00000400018 TMEM150AQ86TG1 271 aa12.15□□□□□ -0.47
SKA3-203ENST00000400018 PCDH19Q8TAB3 1148 aa12.15□□□□□ -0.47
SKA3-203ENST00000400018 CCDC114Q96M63 670 aa12.15□□□□□ -0.47
SKA3-203ENST00000400018 SLC2A13Q96QE2 648 aa12.15□□□□□ -0.47
SKA3-203ENST00000400018 HERC2P3Q9BVR0 1158 aa12.15□□□□□ -0.47
SKA3-203ENST00000400018 CARD9Q9H257 536 aa12.15□□□□□ -0.47
SKA3-203ENST00000400018 PCDH18Q9HCL0 1135 aa12.15□□□□□ -0.47
SKA3-203ENST00000400018 TTC7AQ9ULT0 858 aaPredicted RBP12.15□□□□□ -0.47
SKA3-203ENST00000400018 NOTCH4Q99466 2003 aa12.15□□□□□ -0.47
SKA3-203ENST00000400018 GREB1Q4ZG55 1949 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 hCG_1818297A0A087WSY0 165 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.14□□□□□ -0.47
SKA3-203ENST00000400018 LINC01565O15544 149 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 TLR5O60602 858 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 DAB1O75553 588 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 MYL4P12829 197 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 CTNNA2P26232 953 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 L1CAMP32004 1257 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 GUCY2DQ02846 1103 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 ARL14EPQ8N8R7 260 aaPredicted RBP12.14□□□□□ -0.47
SKA3-203ENST00000400018 MAB21L3Q8N8X9 362 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 SPPL2BQ8TCT7 592 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 P2RY11Q96G91 374 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 GDF15Q99988 308 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 SLC12A8A0AV02 714 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 SLC1A1P43005 524 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 ALDH1A3P47895 512 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 NRIP1P48552 1158 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 RWDD4Q6NW29 188 aaKnown RBP12.14□□□□□ -0.47
SKA3-203ENST00000400018 GAREM2Q75VX8 874 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 TFAP2DQ7Z6R9 452 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 MICALL1Q8N3F8 863 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 RASGEF1CQ8N431 466 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 MRPL43Q8N983 215 aaKnown RBP12.14□□□□□ -0.47
SKA3-203ENST00000400018 KREMEN2Q8NCW0 462 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 SP7Q8TDD2 431 aaPredicted RBP12.14□□□□□ -0.47
SKA3-203ENST00000400018 GOLGA1Q92805 767 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 NACA2Q9H009 215 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 NEUROG2Q9H2A3 272 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 WDCPQ9H6R7 721 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 AAASQ9NRG9 546 aa12.14□□□□□ -0.47
SKA3-203ENST00000400018 AFF4Q9UHB7 1163 aaKnown RBP12.14□□□□□ -0.47
SKA3-203ENST00000400018 MIF4GDA9UHW6 222 aaKnown RBP12.13□□□□□ -0.47
SKA3-203ENST00000400018 IFNB1P01574 187 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 CARSP49589 748 aaKnown RBP12.13□□□□□ -0.47
SKA3-203ENST00000400018 OTUD4Q01804 1114 aaKnown RBP12.13□□□□□ -0.47
SKA3-203ENST00000400018 HP1BP3Q5SSJ5 553 aaPredicted RBP12.13□□□□□ -0.47
SKA3-203ENST00000400018 FAXCQ5TGI0 409 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 VSTM1Q6UX27 236 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 KATNAL2Q8IYT4 538 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 PQLC3Q8N755 202 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 CEP112Q8N8E3 955 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 NIPA2Q8N8Q9 360 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 ACTL9Q8TC94 416 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 RNF139Q8WU17 664 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 PBKQ96KB5 322 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 EPB41L5Q9HCM4 733 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 MAN1C1Q9NR34 630 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 VANGL2Q9ULK5 521 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 ACTL7AQ9Y615 435 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 POLR3GO15318 223 aaPredicted RBP12.13□□□□□ -0.47
SKA3-203ENST00000400018 COCHO43405 550 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 TSPAN3O60637 253 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 HEXIM1O94992 359 aaKnown RBP12.13□□□□□ -0.47
SKA3-203ENST00000400018 GABRR2P28476 465 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 SGSHP51688 502 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 GSCP56915 257 aaPredicted RBP12.13□□□□□ -0.47
SKA3-203ENST00000400018 GAD2Q05329 585 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 RAB33AQ14088 237 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 CLUL1Q15846 466 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 HADHQ16836 314 aaKnown RBP12.13□□□□□ -0.47
SKA3-203ENST00000400018 SLC5A9Q2M3M2 681 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 ERMARDQ5T6L9 678 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 C8orf74Q6P047 294 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 CCDC137Q6PK04 289 aaKnown RBP12.13□□□□□ -0.47
SKA3-203ENST00000400018 CCDC105Q8IYK2 499 aa12.13□□□□□ -0.47
SKA3-203ENST00000400018 ACTRT1Q8TDG2 376 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms