RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 ITGAVP06756 1048 aa17.61■□□□□ 0.41
PTPRA-205ENST00000399903 APRTP07741 180 aa17.61■□□□□ 0.41
PTPRA-205ENST00000399903 VARSP26640 1264 aaKnown RBP17.61■□□□□ 0.41
PTPRA-205ENST00000399903 ANKDD1AQ495B1 522 aa17.61■□□□□ 0.41
PTPRA-205ENST00000399903 LGSNQ5TDP6 509 aa17.61■□□□□ 0.41
PTPRA-205ENST00000399903 CASC4Q6P4E1 433 aa17.61■□□□□ 0.41
PTPRA-205ENST00000399903 EMC1Q8N766 993 aa17.61■□□□□ 0.41
PTPRA-205ENST00000399903 KCTD6Q8NC69 237 aa17.61■□□□□ 0.41
PTPRA-205ENST00000399903 SPATA18Q8TC71 538 aa17.61■□□□□ 0.41
PTPRA-205ENST00000399903 PIH1D1Q9NWS0 290 aaKnown RBP17.61■□□□□ 0.41
PTPRA-205ENST00000399903 RRN3Q9NYV6 651 aa17.61■□□□□ 0.41
PTPRA-205ENST00000399903 SLC17A6Q9P2U8 582 aa17.61■□□□□ 0.41
PTPRA-205ENST00000399903 CCND2P30279 289 aa17.61■□□□□ 0.41
PTPRA-205ENST00000399903 EMP3P54852 163 aa17.61■□□□□ 0.41
PTPRA-205ENST00000399903 PRAMEP78395 509 aa17.61■□□□□ 0.41
PTPRA-205ENST00000399903 SLC18A2Q05940 514 aa17.61■□□□□ 0.41
PTPRA-205ENST00000399903 FLOT2Q14254 428 aa17.61■□□□□ 0.41
PTPRA-205ENST00000399903 DPH6Q7L8W6 267 aa17.61■□□□□ 0.41
PTPRA-205ENST00000399903 PPP4R1Q8TF05 950 aa17.61■□□□□ 0.41
PTPRA-205ENST00000399903 KLRG1Q96E93 195 aa17.61■□□□□ 0.41
PTPRA-205ENST00000399903 MRPS26Q9BYN8 205 aaKnown RBP17.61■□□□□ 0.41
PTPRA-205ENST00000399903 ARMC7Q9H6L4 198 aa17.61■□□□□ 0.41
PTPRA-205ENST00000399903 TIMMDC1Q9NPL8 285 aa17.61■□□□□ 0.41
PTPRA-205ENST00000399903 DRG1Q9Y295 367 aaKnown RBP17.61■□□□□ 0.41
PTPRA-205ENST00000399903 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.61■□□□□ 0.41
PTPRA-205ENST00000399903 ITGAXP20702 1163 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 CDKN2BP42772 138 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 NCCRP1Q6ZVX7 275 aaPredicted RBP17.6■□□□□ 0.41
PTPRA-205ENST00000399903 ZNF512Q96ME7 567 aaPredicted RBP17.6■□□□□ 0.41
PTPRA-205ENST00000399903 SENP6Q9GZR1 1112 aaPredicted RBP17.6■□□□□ 0.41
PTPRA-205ENST00000399903 SDR42E2A6NKP2 422 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 MCF2LO15068 1137 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 ENO3P13929 434 aaPredicted RBP17.6■□□□□ 0.41
PTPRA-205ENST00000399903 CDH15P55291 814 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 PTP4A2Q12974 167 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 DMP1Q13316 513 aaPredicted RBP17.6■□□□□ 0.41
PTPRA-205ENST00000399903 SNAPC2Q13487 334 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 ATP1A4Q13733 1029 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 ABRAQ8N0Z2 381 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 ADAM32Q8TC27 787 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 PIWIL2Q8TC59 973 aaKnown RBP17.6■□□□□ 0.41
PTPRA-205ENST00000399903 JADE3Q92613 823 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 ZFRQ96KR1 1074 aaKnown RBP17.6■□□□□ 0.41
PTPRA-205ENST00000399903 DHRS4Q9BTZ2 278 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 STRA6Q9BX79 667 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 PAIP1Q9H074 479 aaKnown RBP17.6■□□□□ 0.41
PTPRA-205ENST00000399903 SELENONQ9NZV5 590 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 MYH9P35579 1960 aaKnown RBP17.6■□□□□ 0.41
PTPRA-205ENST00000399903 CSPG5O95196 566 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 KLHL2O95198 593 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 CD1EP15812 388 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 RPS12P25398 132 aaKnown RBP17.6■□□□□ 0.41
PTPRA-205ENST00000399903 RPL10P27635 214 aaKnown RBP17.6■□□□□ 0.41
PTPRA-205ENST00000399903 PRKCEQ02156 737 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 DPYSL3Q14195 570 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 TAF5Q15542 800 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 EML3Q32P44 896 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 SCARA3Q6AZY7 606 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 GADL1Q6ZQY3 521 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 USP37Q86T82 979 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 FBXW8Q8N3Y1 598 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 FAM156AQ8NDB6 213 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 ATXN7L3BQ96GX2 97 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 TBX20Q9UMR3 447 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 DOCK5Q9H7D0 1870 aa17.6■□□□□ 0.41
PTPRA-205ENST00000399903 CNTNAP2Q9UHC6 1331 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 SLC1A6P48664 564 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 ACTR2P61160 394 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 CDKL1Q00532 357 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 KRT80Q6KB66 452 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 SCARA5Q6ZMJ2 495 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 TMEM161BQ8NDZ6 487 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 NSUN6Q8TEA1 469 aaKnown RBP17.59■□□□□ 0.41
PTPRA-205ENST00000399903 ZBTB45Q96K62 511 aaPredicted RBP17.59■□□□□ 0.41
PTPRA-205ENST00000399903 VPS33BQ9H267 617 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 JPH1Q9HDC5 661 aaPredicted RBP17.59■□□□□ 0.41
PTPRA-205ENST00000399903 RSL24D1Q9UHA3 163 aaKnown RBP17.59■□□□□ 0.41
PTPRA-205ENST00000399903 BARX2Q9UMQ3 279 aaPredicted RBP17.59■□□□□ 0.41
PTPRA-205ENST00000399903 POLIQ9UNA4 740 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 EXOC7Q9UPT5 735 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 HEY1Q9Y5J3 304 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 FER1L6Q2WGJ9 1857 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 PSME4Q14997 1843 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 SF3B1O75533 1304 aaKnown RBP eCLIP17.59■□□□□ 0.412e-6■■■■■ 128.4
PTPRA-205ENST00000399903 KCNA2P16389 499 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 MAPK10P53779 464 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 CYP24A1Q07973 514 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 SLC39A4Q6P5W5 647 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 TRMT10BQ6PF06 316 aaKnown RBP17.59■□□□□ 0.41
PTPRA-205ENST00000399903 ZNF410Q86VK4 478 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 REPS2Q8NFH8 660 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 FNDC8Q8TC99 324 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 CDRT15Q96T59 188 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 RNPEPQ9H4A4 650 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 AS3MTQ9HBK9 375 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 CCNT2O60583 730 aaKnown RBP17.59■□□□□ 0.41
PTPRA-205ENST00000399903 BPGMP07738 259 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 IGBP1P78318 339 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 ZNF252P-AS1Q0IIN9 211 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 VGLL4Q14135 290 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms