RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 SMYD2Q9NRG4 433 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 A0A1B0GTW7 788 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 ERVH48-1M5A8F1 160 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 NEMP1O14524 444 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 FKBP6O75344 327 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 PABPC4LP0CB38 370 aaKnown RBP10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 CSH1P0DML2 217 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 CSH2P0DML3 217 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 PSMC1P62191 440 aaKnown RBP10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 MRPS22P82650 360 aaKnown RBP10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 MAP3K10Q02779 954 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 PDK1Q15118 436 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 TLR1Q15399 786 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 ZACNQ401N2 412 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 PTAR1Q7Z6K3 402 aaPredicted RBP10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 ZBTB46Q86UZ6 589 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 CDR2LQ86X02 465 aaPredicted RBP10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 ZNF677Q86XU0 584 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 CHURC1Q8WUH1 139 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 USP13Q92995 863 aaPredicted RBP10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 CLMNQ96JQ2 1002 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 MIS12Q9H081 205 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 RPS6KL1Q9Y6S9 549 aa10.22□□□□□ -0.77
PTCHD4-202ENST00000398738 NOP56O00567 594 aaKnown RBP10.21□□□□□ -0.77
PTCHD4-202ENST00000398738 XPO1O14980 1071 aaKnown RBP10.21□□□□□ -0.77
PTCHD4-202ENST00000398738 CSDE1O75534 798 aaKnown RBP10.21□□□□□ -0.77
PTCHD4-202ENST00000398738 CDH6P55285 790 aa10.21□□□□□ -0.77
PTCHD4-202ENST00000398738 TBL3Q12788 808 aaKnown RBP10.21□□□□□ -0.77
PTCHD4-202ENST00000398738 INTS6LQ5JSJ4 861 aaKnown RBP10.21□□□□□ -0.77
PTCHD4-202ENST00000398738 C6orf52Q5T4I8 152 aa10.21□□□□□ -0.77
PTCHD4-202ENST00000398738 ACBD5Q5T8D3 534 aaPredicted RBP10.21□□□□□ -0.77
PTCHD4-202ENST00000398738 KLHDC10Q6PID8 442 aa10.21□□□□□ -0.77
PTCHD4-202ENST00000398738 HHIPL2Q6UWX4 724 aa10.21□□□□□ -0.77
PTCHD4-202ENST00000398738 PHF13Q86YI8 300 aaPredicted RBP10.21□□□□□ -0.77
PTCHD4-202ENST00000398738 GTF3C2Q8WUA4 911 aaPredicted RBP10.21□□□□□ -0.77
PTCHD4-202ENST00000398738 KLRG1Q96E93 195 aa10.21□□□□□ -0.77
PTCHD4-202ENST00000398738 PRMT6Q96LA8 375 aaPredicted RBP10.21□□□□□ -0.77
PTCHD4-202ENST00000398738 MRPL1Q9BYD6 325 aaKnown RBP10.21□□□□□ -0.77
PTCHD4-202ENST00000398738 SSU72Q9NP77 194 aaKnown RBP10.21□□□□□ -0.77
PTCHD4-202ENST00000398738 CNTN3Q9P232 1028 aa10.21□□□□□ -0.77
PTCHD4-202ENST00000398738 GNEQ9Y223 722 aaKnown RBP10.21□□□□□ -0.77
PTCHD4-202ENST00000398738 POMPQ9Y244 141 aa10.21□□□□□ -0.77
PTCHD4-202ENST00000398738 LRCH4O75427 683 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 SUPT3HO75486 399 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 KRT19P08727 400 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 KDELR1P24390 212 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 PCSK6P29122 969 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 SERPINB5P36952 375 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 GRIA1P42261 906 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 RAP1GAPP47736 663 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 PKNOX1P55347 436 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 ROR1Q01973 937 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 ELOAQ14241 798 aaKnown RBP10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 LARGE2Q8N3Y3 721 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 TMEM35BQ8NCS4 154 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 TFAP2BQ92481 460 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 PGLYRP2Q96PD5 576 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 HAPLN3Q96S86 360 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 DHRS4Q9BTZ2 278 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 MSTO1Q9BUK6 570 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 POLR3FQ9H1D9 316 aaPredicted RBP10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 RNPEPQ9H4A4 650 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 COPS7BQ9H9Q2 264 aaPredicted RBP10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 HSFX1Q9UBD0 423 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 CDH22Q9UJ99 828 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 QSER1Q2KHR3 1735 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 EP400Q96L91 3159 aa10.21□□□□□ -0.78
PTCHD4-202ENST00000398738 DKC1O60832 514 aaKnown RBP eCLIP10.2□□□□□ -0.785e-9■■■■■ 40.8
PTCHD4-202ENST00000398738 SIN3BO75182 1162 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 C4BPAP04003 597 aaKnown RBP10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 MAPTP10636 758 aaKnown RBP10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 CPOXP36551 454 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 ABCG1P45844 678 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 ALDH1A3P47895 512 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 MYL6P60660 151 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 TFAMQ00059 246 aaKnown RBP10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 SLC18A2Q05940 514 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 DBN1Q16643 649 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 HADHQ16836 314 aaKnown RBP10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 ANKRD20A4Q4UJ75 823 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 LGSNQ5TDP6 509 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 B3GNT9Q6UX72 402 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 FRMD7Q6ZUT3 714 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 MPP5Q8N3R9 675 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 STKLD1Q8NE28 680 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 DEPDC1BQ8WUY9 529 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 CLP1Q92989 425 aaKnown RBP10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 DGCR14Q96DF8 476 aaKnown RBP10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 HSPBAP1Q96EW2 488 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 FAM210AQ96ND0 272 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 TSPAN10Q9H1Z9 355 aaPredicted RBP10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 PPCSQ9HAB8 311 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 ANLNQ9NQW6 1124 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 UBAP1Q9NZ09 502 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 FBXO40Q9UH90 709 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 CTDP1Q9Y5B0 961 aaPredicted RBP10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 CNTNAP2Q9UHC6 1331 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 BTAF1O14981 1849 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 H3BSA7 217 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 FOXD2O60548 495 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms