RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 NUDT5Q9UKK9 219 aa10.35□□□□□ -0.75
NIFKP1-201ENST00000398317 FRMD4BQ9Y2L6 1034 aa10.35□□□□□ -0.75
NIFKP1-201ENST00000398317 ZZEF1O43149 2961 aa10.35□□□□□ -0.75
NIFKP1-201ENST00000398317 ATXN2Q99700 1313 aaKnown RBP10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 IGF2RP11717 2491 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 SPEGQ15772 3267 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 HHLA1C9JL84 531 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 NEDD8-MDP1E9PL57 170 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 CYP26A1O43174 497 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 CALUO43852 315 aaPredicted RBP10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 GREM1O60565 184 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 FAM200BP0CF97 657 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 TRIM49P0CI25 452 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 TRIM49CP0CI26 452 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 CMA1P23946 247 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 VAMP7P51809 220 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 MCCD1P59942 119 aaPredicted RBP10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 SHC2P98077 582 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 TRIM61Q5EBN2 209 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 C10orf76Q5T2E6 689 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 SH3PXD2AQ5TCZ1 1133 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 EGFLAMQ63HQ2 1017 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 CLEC20AQ6ZU45 233 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 UNC93AQ86WB7 457 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 TERB1Q8NA31 727 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 TMEM174Q8WUU8 243 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 TAF4BQ92750 862 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 BHMTQ93088 406 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 CYFIP2Q96F07 1278 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 MMRN2Q9H8L6 949 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 TMEM74BQ9NUR3 256 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 DNAJC17Q9NVM6 304 aaKnown RBP10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 MAPK8IP1Q9UQF2 711 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 SCML2Q9UQR0 700 aa10.34□□□□□ -0.75
NIFKP1-201ENST00000398317 A0A1W2PQH9 124 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 TTLL8A6PVC2 850 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 IKBKBO14920 756 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 SPINT1O43278 529 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 TOP3BO95985 862 aaKnown RBP10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 HOXB2P14652 356 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 TYRP14679 529 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 GABRG2P18507 467 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 CD58P19256 250 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 ACO1P21399 889 aaKnown RBP10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 ITPKAP23677 461 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 ATP5C1P36542 298 aaKnown RBP10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 MAPK8P45983 427 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 GCLMP48507 274 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 PPP3CAQ08209 521 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 ZNF252P-AS1Q0IIN9 211 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 PREPLQ4J6C6 727 aaPredicted RBP10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 GRAMD4Q6IC98 578 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 TOGARAM2Q6ZUX3 1019 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 HTR3DQ70Z44 454 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 TAS1R2Q8TE23 839 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 ACOX2Q99424 681 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 HNRNPABQ99729 332 aaKnown RBP10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 DUSP9Q99956 384 aaKnown RBP10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 BBS2Q9BXC9 721 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 NUSAP1Q9BXS6 441 aaKnown RBP10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 NMUR1Q9HB89 426 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 FSCN3Q9NQT6 498 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 USP25Q9UHP3 1055 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 HPSEQ9Y251 543 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 KNL1Q8NG31 2342 aa10.33□□□□□ -0.76
NIFKP1-201ENST00000398317 A0A1W2PQF6 199 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 PRRT4C9JH25 899 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 KIF20AO95235 890 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 RARGP13631 454 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 ENGP17813 658 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 SPINK2P20155 84 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 NR2F2P24468 414 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 NTSR1P30989 418 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 SYKP43405 635 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 NDUFA8P51970 172 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 RPL6Q02878 288 aaKnown RBP10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 INCA1Q0VD86 236 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 BYSLQ13895 437 aaKnown RBP10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 ZNF394Q53GI3 561 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 C10orf120Q5SQS8 335 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 LYSMD4Q5XG99 296 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 KIAA1211LQ6NV74 962 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 TRMT11Q7Z4G4 463 aaKnown RBP10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 SCD5Q86SK9 330 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 SYT12Q8IV01 421 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 FAM186BQ8IYM0 893 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 DEFB124Q8NES8 71 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 ZNF592Q92610 1267 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 P2RY11Q96G91 374 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 SPATA32Q96LK8 384 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 XPO6Q96QU8 1125 aaKnown RBP10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 NT5C1AQ9BXI3 368 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 SLC6A17Q9H1V8 727 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 PLK2Q9NYY3 685 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 CALCOCO1Q9P1Z2 691 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 EVLQ9UI08 416 aaPredicted RBP10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 NAGPAQ9UK23 515 aa10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 LSM7Q9UK45 103 aaKnown RBP10.32□□□□□ -0.76
NIFKP1-201ENST00000398317 PILRBQ9UKJ0 227 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms