RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 ZBTB16Q05516 673 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 TBL3Q12788 808 aaKnown RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 STAT4Q14765 748 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 PDK3Q15120 406 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 TRMT5Q32P41 509 aaKnown RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 MMEL1Q495T6 779 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 BSPRYQ5W0U4 402 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 DCAF15Q66K64 600 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 DARS2Q6PI48 645 aaKnown RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 SLC2A7Q6PXP3 512 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 NET1Q7Z628 596 aaPredicted RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 MTMR14Q8NCE2 650 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 CCDC110Q8TBZ0 833 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 TCP10LQ8TDR4 215 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 SLCO2A1Q92959 643 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 PTCD3Q96EY7 689 aaKnown RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 CFAP36Q96G28 342 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 PRR11Q96HE9 360 aaPredicted RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 CDHR1Q96JP9 859 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 ZFRQ96KR1 1074 aaKnown RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 FAM161BQ96MY7 647 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 CYTH2Q99418 400 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 PAFAH2Q99487 392 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 SLC13A1Q9BZW2 595 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 NIF3L1Q9GZT8 377 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 ZNF395Q9H8N7 513 aaPredicted RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 NGRNQ9NPE2 291 aaKnown RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 NRBP2Q9NSY0 501 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 FAM49BQ9NUQ9 324 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 ARL8BQ9NVJ2 186 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 HOXC10Q9NYD6 342 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 SSX2IPQ9Y2D8 614 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 COL2A1P02458 1487 aaPredicted RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 SH3PXD2BA1X283 911 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 SOWAHBA6NEL2 793 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 NDUFB5O43674 189 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 PDGFRBP09619 1106 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 GSTT2P0CG29 244 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 GSTT2BP0CG30 244 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 AMPD1P23109 780 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 MIPP30301 263 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 RPL22P35268 128 aaKnown RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 ASPAP45381 313 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 PHKA2P46019 1235 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 ATXN1P54253 815 aaKnown RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 ARPC4P59998 168 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 EIF3EP60228 445 aaKnown RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 RELAQ04206 551 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 NR1H3Q13133 447 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 VGLL4Q14135 290 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 BCL2A1Q16548 175 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 PDK4Q16654 411 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 CTC1Q2NKJ3 1217 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 PLEKHG4Q58EX7 1191 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 GLRA4Q5JXX5 417 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 RNASEH2BQ5TBB1 312 aaKnown RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 EFCAB12Q6NXP0 572 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 PDSS2Q86YH6 399 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 SCUBE3Q8IX30 993 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 IQCF2Q8IXL9 164 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 C7orf31Q8N865 590 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 RFWD2Q8NHY2 731 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 CPT1BQ92523 772 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 ITPKCQ96DU7 683 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 KLRG1Q96E93 195 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 SPATA33Q96N06 139 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 PGLYRP2Q96PD5 576 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 FAM111AQ96PZ2 611 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 WDR83Q9BRX9 315 aaKnown RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 MECRQ9BV79 373 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 MRPL4Q9BYD3 311 aaKnown RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 B3GNT5Q9BYG0 378 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 CEP41Q9BYV8 373 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 SDCBP2Q9H190 292 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 RNPEPQ9H4A4 650 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 ELP3Q9H9T3 547 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 PLGRKTQ9HBL7 147 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 GPAMQ9HCL2 828 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 FBXO6Q9NRD1 293 aaPredicted RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 MAP3K20Q9NYL2 800 aaKnown RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 ARMCX1Q9P291 453 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 HESX1Q9UBX0 185 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 FAM32AQ9Y421 112 aaKnown RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 MRPL42Q9Y6G3 142 aaKnown RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 CLUHO75153 1309 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 ADGRA2Q96PE1 1338 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 H7C0C1 242 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 FBP2O00757 339 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 TXNDC9O14530 226 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 AP1G1O43747 822 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 MAGEC1O60732 1142 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 FKBP6O75344 327 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 TRMUO75648 421 aaKnown RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 CALB1P05937 261 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 APRTP07741 180 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 ELK3P41970 407 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 ATP5OP48047 213 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 CCR3P51677 355 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 CLDN10P78369 228 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 CAV1Q03135 178 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms