RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 HOMER3Q9NSC5 361 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 DZANK1Q9NVP4 752 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 ZDHHC7Q9NXF8 308 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 GOLGA6AQ9NYA3 693 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 IL37Q9NZH6 218 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 SCML2Q9UQR0 700 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 PLAAQ9Y263 795 aa15.52■□□□□ 0.08
CAPN3-207ENST00000397200 SIGLEC16A6NMB1 481 aa15.51■□□□□ 0.07
CAPN3-207ENST00000397200 CCL16O15467 120 aa15.51■□□□□ 0.07
CAPN3-207ENST00000397200 XYLBO75191 536 aa15.51■□□□□ 0.07
CAPN3-207ENST00000397200 RFPL2O75678 378 aa15.51■□□□□ 0.07
CAPN3-207ENST00000397200 ECEL1O95672 775 aa15.51■□□□□ 0.07
CAPN3-207ENST00000397200 SCNN1AP37088 669 aa15.51■□□□□ 0.07
CAPN3-207ENST00000397200 KCNC3Q14003 757 aa15.51■□□□□ 0.07
CAPN3-207ENST00000397200 EFHC1Q5JVL4 640 aa15.51■□□□□ 0.07
CAPN3-207ENST00000397200 DAB2IPQ5VWQ8 1189 aa15.51■□□□□ 0.07
CAPN3-207ENST00000397200 ZNF771Q7L3S4 317 aaPredicted RBP15.51■□□□□ 0.07
CAPN3-207ENST00000397200 SLC26A9Q7LBE3 791 aa15.51■□□□□ 0.07
CAPN3-207ENST00000397200 DNAJB7Q7Z6W7 309 aaPredicted RBP15.51■□□□□ 0.07
CAPN3-207ENST00000397200 VN1R2Q8NFZ6 395 aa15.51■□□□□ 0.07
CAPN3-207ENST00000397200 FAM76AQ8TAV0 307 aa15.51■□□□□ 0.07
CAPN3-207ENST00000397200 NDRG1Q92597 394 aaKnown RBP15.51■□□□□ 0.07
CAPN3-207ENST00000397200 ZBTB9Q96C00 473 aa15.51■□□□□ 0.07
CAPN3-207ENST00000397200 PIWIL1Q96J94 861 aaKnown RBP15.51■□□□□ 0.07
CAPN3-207ENST00000397200 SLITRK1Q96PX8 696 aa15.51■□□□□ 0.07
CAPN3-207ENST00000397200 METTL5Q9NRN9 209 aaKnown RBP15.51■□□□□ 0.07
CAPN3-207ENST00000397200 UXTQ9UBK9 157 aaPredicted RBP15.51■□□□□ 0.07
CAPN3-207ENST00000397200 PRRC2BQ5JSZ5 2229 aaKnown RBP15.51■□□□□ 0.07
CAPN3-207ENST00000397200 FAM92AA1XBS5 289 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 SHOX2O60902 331 aaPredicted RBP15.5■□□□□ 0.07
CAPN3-207ENST00000397200 KRT14P02533 472 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 RALAP11233 206 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 KRT3P12035 628 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 HMGA1P17096 107 aaKnown RBP15.5■□□□□ 0.07
CAPN3-207ENST00000397200 COPS2P61201 443 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 TAF10Q12962 218 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 PTK6Q13882 451 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 DCUN1D2Q6PH85 259 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 POLNQ7Z5Q5 900 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 CCDC105Q8IYK2 499 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 FBXO25Q8TCJ0 367 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 ART4Q93070 314 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 FAM149B1Q96BN6 582 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 TRMT2BQ96GJ1 504 aaKnown RBP15.5■□□□□ 0.07
CAPN3-207ENST00000397200 RBM41Q96IZ5 413 aaKnown RBP15.5■□□□□ 0.07
CAPN3-207ENST00000397200 MYRFLQ96LU7 910 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 OSBPL8Q9BZF1 889 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 TRIM31Q9BZY9 425 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 SFXN1Q9H9B4 322 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 ASNSD1Q9NWL6 643 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 SNX24Q9Y343 169 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 NEU2Q9Y3R4 380 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 CCDC195A0A1B0GUA6 201 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 YJEFN3A6XGL0 299 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 E7ENQ6 273 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 GRAP2O75791 330 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 LTFP02788 710 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 SKOR1P84550 965 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 TAF5Q15542 800 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 CCNG2Q16589 344 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 TMEM184AQ6ZMB5 413 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 MON1AQ86VX9 555 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 RCOR2Q8IZ40 523 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 ARHGAP18Q8N392 663 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 MICALL1Q8N3F8 863 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 PDZD8Q8NEN9 1154 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 GRK7Q8WTQ7 553 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 EPB41L4BQ9H329 900 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 GMIPQ9P107 970 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 WHRNQ9P202 907 aa15.5■□□□□ 0.07
CAPN3-207ENST00000397200 TP73O15350 636 aa15.49■□□□□ 0.07
CAPN3-207ENST00000397200 LINC01565O15544 149 aa15.49■□□□□ 0.07
CAPN3-207ENST00000397200 GLP2RO95838 553 aa15.49■□□□□ 0.07
CAPN3-207ENST00000397200 POU2F2P09086 479 aa15.49■□□□□ 0.07
CAPN3-207ENST00000397200 NUDT17P0C025 328 aa15.49■□□□□ 0.07
CAPN3-207ENST00000397200 KCNJ1P48048 391 aa15.49■□□□□ 0.07
CAPN3-207ENST00000397200 YWHAGP61981 247 aaKnown RBP eCLIP15.49■□□□□ 0.07
CAPN3-207ENST00000397200 YWHAZP63104 245 aaKnown RBP15.49■□□□□ 0.07
CAPN3-207ENST00000397200 DHX9Q08211 1270 aaKnown RBP15.49■□□□□ 0.07
CAPN3-207ENST00000397200 ZNF844Q08AG5 666 aa15.49■□□□□ 0.07
CAPN3-207ENST00000397200 DRICH1Q6PGQ1 229 aaPredicted RBP15.49■□□□□ 0.07
CAPN3-207ENST00000397200 RHBDF2Q6PJF5 856 aa15.49■□□□□ 0.07
CAPN3-207ENST00000397200 BHLHA9Q7RTU4 235 aa15.49■□□□□ 0.07
CAPN3-207ENST00000397200 ANKS1BQ7Z6G8 1248 aa15.49■□□□□ 0.07
CAPN3-207ENST00000397200 C1orf54Q8WWF1 131 aa15.49■□□□□ 0.07
CAPN3-207ENST00000397200 OVCA2Q8WZ82 227 aa15.49■□□□□ 0.07
CAPN3-207ENST00000397200 CORO1BQ9BR76 489 aa15.49■□□□□ 0.07
CAPN3-207ENST00000397200 TRIM62Q9BVG3 475 aa15.49■□□□□ 0.07
CAPN3-207ENST00000397200 PRKD2Q9BZL6 878 aa15.49■□□□□ 0.07
CAPN3-207ENST00000397200 POPDC2Q9HBU9 364 aa15.49■□□□□ 0.07
CAPN3-207ENST00000397200 TMBIM4Q9HC24 238 aa15.49■□□□□ 0.07
CAPN3-207ENST00000397200 ASAH2Q9NR71 780 aa15.49■□□□□ 0.07
CAPN3-207ENST00000397200 TLR8Q9NR97 1041 aaKnown RBP15.49■□□□□ 0.07
CAPN3-207ENST00000397200 DDX56Q9NY93 547 aaKnown RBP15.49■□□□□ 0.07
CAPN3-207ENST00000397200 USTQ9Y2C2 406 aa15.49■□□□□ 0.07
CAPN3-207ENST00000397200 R3HDM2Q9Y2K5 976 aaKnown RBP15.49■□□□□ 0.07
CAPN3-207ENST00000397200 A0A1W2PQH9 124 aa15.48■□□□□ 0.07
CAPN3-207ENST00000397200 HMGB1P1B2RPK0 211 aaPredicted RBP15.48■□□□□ 0.07
CAPN3-207ENST00000397200 DAB1O75553 588 aa15.48■□□□□ 0.07
CAPN3-207ENST00000397200 TCF4P15884 667 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms