RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 LTFP02788 710 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 KRT15P19012 456 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 ELK3P41970 407 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 RABGGTBP53611 331 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 CORO7P57737 925 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 HEATR6Q6AI08 1181 aaKnown RBP15.48■□□□□ 0.07
CBX3-202ENST00000396386 KCNT2Q6UVM3 1135 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 CCDC110Q8TBZ0 833 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 FBF1Q8TES7 1133 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 TFB1MQ8WVM0 346 aaKnown RBP15.48■□□□□ 0.07
CBX3-202ENST00000396386 NTAN1Q96AB6 310 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 KCNK16Q96T55 309 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 SLC9A7Q96T83 725 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 CSNK1G1Q9HCP0 422 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 PIGVQ9NUD9 493 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 TMEM30AQ9NV96 361 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 RRN3Q9NYV6 651 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 MYO16Q9Y6X6 1858 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 MOXD2PA6NHM9 499 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 INPPL1O15357 1258 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 DGKIO75912 1065 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 USP17L7P0C7H9 530 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 MTM1Q13496 603 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 EFTUD2Q15029 972 aaKnown RBP eCLIP15.48■□□□□ 0.072e-11■■■■□ 23.8
CBX3-202ENST00000396386 LRRC14Q15048 493 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 FAXCQ5TGI0 409 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 C3orf62Q6ZUJ4 267 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 ZNF598Q86UK7 904 aaKnown RBP15.48■□□□□ 0.07
CBX3-202ENST00000396386 TAX1BP1Q86VP1 789 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 LRRC34Q8IZ02 419 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 CD99L2Q8TCZ2 262 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 HASPINQ8TF76 798 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 RSPH1Q8WYR4 309 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 SEC16BQ96JE7 1060 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 CAPNS2Q96L46 248 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 GLT1D1Q96MS3 346 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 PAFAH2Q99487 392 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 TRABDQ9H4I3 376 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 MFHAS1Q9Y4C4 1052 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 TEX264Q9Y6I9 313 aa15.48■□□□□ 0.07
CBX3-202ENST00000396386 FAM47DPA6NHR8 397 aa15.47■□□□□ 0.07
CBX3-202ENST00000396386 KBTBD13C9JR72 458 aa15.47■□□□□ 0.07
CBX3-202ENST00000396386 MYO1CO00159 1063 aa15.47■□□□□ 0.07
CBX3-202ENST00000396386 EEF2KO00418 725 aaKnown RBP15.47■□□□□ 0.07
CBX3-202ENST00000396386 FYNP06241 537 aa15.47■□□□□ 0.07
CBX3-202ENST00000396386 VIMP08670 466 aaKnown RBP15.47■□□□□ 0.07
CBX3-202ENST00000396386 TPSB2P20231 275 aa15.47■□□□□ 0.07
CBX3-202ENST00000396386 SCAPQ12770 1279 aa15.47■□□□□ 0.07
CBX3-202ENST00000396386 TPSAB1Q15661 275 aa15.47■□□□□ 0.07
CBX3-202ENST00000396386 PKN2Q16513 984 aaKnown RBP15.47■□□□□ 0.07
CBX3-202ENST00000396386 SYCP2LQ5T4T6 812 aa15.47■□□□□ 0.07
CBX3-202ENST00000396386 COL13A1Q5TAT6 717 aaPredicted RBP15.47■□□□□ 0.07
CBX3-202ENST00000396386 FAM171BQ6P995 826 aa15.47■□□□□ 0.07
CBX3-202ENST00000396386 CD300LGQ6UXG3 332 aa15.47■□□□□ 0.07
CBX3-202ENST00000396386 MCUQ8NE86 351 aa15.47■□□□□ 0.07
CBX3-202ENST00000396386 LRRN4Q8WUT4 740 aa15.47■□□□□ 0.07
CBX3-202ENST00000396386 IRGQQ8WZA9 623 aa15.47■□□□□ 0.07
CBX3-202ENST00000396386 SGSM3Q96HU1 749 aa15.47■□□□□ 0.07
CBX3-202ENST00000396386 SMC6Q96SB8 1091 aa15.47■□□□□ 0.07
CBX3-202ENST00000396386 DHRS4Q9BTZ2 278 aa15.47■□□□□ 0.07
CBX3-202ENST00000396386 RHOBTB2Q9BYZ6 727 aa15.47■□□□□ 0.07
CBX3-202ENST00000396386 ETNK1Q9HBU6 452 aa15.47■□□□□ 0.07
CBX3-202ENST00000396386 DMAP1Q9NPF5 467 aaPredicted RBP15.47■□□□□ 0.07
CBX3-202ENST00000396386 SMG5Q9UPR3 1016 aaKnown RBP15.47■□□□□ 0.07
CBX3-202ENST00000396386 PRPF4O43172 522 aaKnown RBP eCLIP15.46■□□□□ 0.07
CBX3-202ENST00000396386 CREB3O43889 395 aa15.46■□□□□ 0.07
CBX3-202ENST00000396386 STK10O94804 968 aaKnown RBP15.46■□□□□ 0.07
CBX3-202ENST00000396386 APRTP07741 180 aa15.46■□□□□ 0.07
CBX3-202ENST00000396386 CKBP12277 381 aa15.46■□□□□ 0.07
CBX3-202ENST00000396386 NCAM1P13591 858 aa15.46■□□□□ 0.07
CBX3-202ENST00000396386 VAV1P15498 845 aa15.46■□□□□ 0.07
CBX3-202ENST00000396386 STX2P32856 288 aa15.46■□□□□ 0.07
CBX3-202ENST00000396386 YWHAGP61981 247 aaKnown RBP eCLIP15.46■□□□□ 0.07
CBX3-202ENST00000396386 MPP2Q14168 576 aa15.46■□□□□ 0.07
CBX3-202ENST00000396386 MAPRE1Q15691 268 aaKnown RBP15.46■□□□□ 0.07
CBX3-202ENST00000396386 OVOS1Q6IE37 1185 aa15.46■□□□□ 0.07
CBX3-202ENST00000396386 YTHDF3Q7Z739 585 aaKnown RBP15.46■□□□□ 0.07
CBX3-202ENST00000396386 THEM5Q8N1Q8 247 aa15.46■□□□□ 0.07
CBX3-202ENST00000396386 RAET1EQ8TD07 263 aa15.46■□□□□ 0.07
CBX3-202ENST00000396386 CKAP2Q8WWK9 683 aa15.46■□□□□ 0.07
CBX3-202ENST00000396386 MRRFQ96E11 262 aaKnown RBP15.46■□□□□ 0.07
CBX3-202ENST00000396386 PGAP3Q96FM1 320 aaPredicted RBP15.46■□□□□ 0.07
CBX3-202ENST00000396386 SUSD3Q96L08 255 aa15.46■□□□□ 0.07
CBX3-202ENST00000396386 CYTH2Q99418 400 aa15.46■□□□□ 0.07
CBX3-202ENST00000396386 PKMYT1Q99640 499 aa15.46■□□□□ 0.07
CBX3-202ENST00000396386 TMPRSS4Q9NRS4 437 aa15.46■□□□□ 0.07
CBX3-202ENST00000396386 SAMD15Q9P1V8 674 aa15.46■□□□□ 0.07
CBX3-202ENST00000396386 A0A0A0MRY4 1105 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 TYMPP19971 482 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 TSPY1Q01534 308 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 DPYSQ14117 519 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 PAFAH1B3Q15102 231 aaKnown RBP15.46■□□□□ 0.06
CBX3-202ENST00000396386 PRKD1Q15139 912 aaPredicted RBP15.46■□□□□ 0.06
CBX3-202ENST00000396386 DCLRE1AQ6PJP8 1040 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 ADGRD1Q6QNK2 874 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 GLB1LQ6UWU2 654 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 RFX8Q6ZV50 586 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 BHLHA9Q7RTU4 235 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 IGDCC3Q8IVU1 814 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 CCDC33Q8N5R6 958 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms