RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 CCDC63Q8NA47 563 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 HTR3CQ8WXA8 447 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 FAM149B1Q96BN6 582 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 CFAP36Q96G28 342 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 APOPT1Q96IL0 206 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 SENP8Q96LD8 212 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 SLC9A7Q96T83 725 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 FAM105AQ9NUU6 356 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 USH1CQ9Y6N9 552 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 A0A0A0MRY4 1105 aa17.36■□□□□ 0.37
NUP50-202ENST00000396096 MYADML2A6NDP7 307 aa17.36■□□□□ 0.37
NUP50-202ENST00000396096 APOEP02649 317 aa17.36■□□□□ 0.37
NUP50-202ENST00000396096 FAM200BP0CF97 657 aa17.36■□□□□ 0.37
NUP50-202ENST00000396096 ACAT1P24752 427 aaKnown RBP17.36■□□□□ 0.37
NUP50-202ENST00000396096 SKIV2L2P42285 1042 aaKnown RBP17.36■□□□□ 0.37
NUP50-202ENST00000396096 LHX1P48742 406 aa17.36■□□□□ 0.37
NUP50-202ENST00000396096 ZNF157P51786 506 aaPredicted RBP17.36■□□□□ 0.37
NUP50-202ENST00000396096 AIF1P55008 147 aa17.36■□□□□ 0.37
NUP50-202ENST00000396096 GJA9P57773 515 aa17.36■□□□□ 0.37
NUP50-202ENST00000396096 PRKD1Q15139 912 aaPredicted RBP17.36■□□□□ 0.37
NUP50-202ENST00000396096 DCAF6Q58WW2 860 aa17.36■□□□□ 0.37
NUP50-202ENST00000396096 MDH1BQ5I0G3 518 aa17.36■□□□□ 0.37
NUP50-202ENST00000396096 LRRC6Q86X45 466 aa17.36■□□□□ 0.37
NUP50-202ENST00000396096 CHSY1Q86X52 802 aa17.36■□□□□ 0.37
NUP50-202ENST00000396096 IFNL1Q8IU54 200 aa17.36■□□□□ 0.37
NUP50-202ENST00000396096 TRPV1Q8NER1 839 aa17.36■□□□□ 0.37
NUP50-202ENST00000396096 NDRG1Q92597 394 aaKnown RBP17.36■□□□□ 0.37
NUP50-202ENST00000396096 WNT8BQ93098 351 aa17.36■□□□□ 0.37
NUP50-202ENST00000396096 SERAC1Q96JX3 654 aa17.36■□□□□ 0.37
NUP50-202ENST00000396096 SPATA13Q96N96 652 aa17.36■□□□□ 0.37
NUP50-202ENST00000396096 EBNA1BP2Q99848 306 aaKnown RBP17.36■□□□□ 0.37
NUP50-202ENST00000396096 SLCO1B3Q9NPD5 702 aa17.36■□□□□ 0.37
NUP50-202ENST00000396096 CRTAC1Q9NQ79 661 aa17.36■□□□□ 0.37
NUP50-202ENST00000396096 ST3GAL5Q9UNP4 418 aa17.36■□□□□ 0.37
NUP50-202ENST00000396096 C9IYK1 514 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 MGRN1O60291 552 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 ZNF189O75820 626 aaPredicted RBP17.35■□□□□ 0.37
NUP50-202ENST00000396096 MLNP12872 115 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 VAV1P15498 845 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 ETV4P43268 484 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 SEPT7Q16181 437 aaKnown RBP17.35■□□□□ 0.37
NUP50-202ENST00000396096 UNC5AQ6ZN44 842 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 CYS1Q717R9 158 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 RSPH3Q86UC2 560 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 SIX6OS1Q8N1H7 587 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 ANKLE1Q8NAG6 615 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 ZNF398Q8TD17 642 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 RNF139Q8WU17 664 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 LRRN4Q8WUT4 740 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 MED10Q9BTT4 135 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 SENP6Q9GZR1 1112 aaPredicted RBP17.35■□□□□ 0.37
NUP50-202ENST00000396096 ECT2Q9H8V3 914 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 EIF2B3Q9NR50 452 aaKnown RBP17.35■□□□□ 0.37
NUP50-202ENST00000396096 DDX43Q9NXZ2 648 aaKnown RBP17.35■□□□□ 0.37
NUP50-202ENST00000396096 MFHAS1Q9Y4C4 1052 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 TNPO2O14787 897 aaKnown RBP17.35■□□□□ 0.37
NUP50-202ENST00000396096 MFSD11O43934 449 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 LPXNO60711 386 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 GLUD2P49448 558 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 NDUFV1P49821 464 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 TKTL1P51854 596 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 PITX1P78337 314 aaPredicted RBP17.35■□□□□ 0.37
NUP50-202ENST00000396096 ELF3P78545 371 aaPredicted RBP17.35■□□□□ 0.37
NUP50-202ENST00000396096 PAFAH1B3Q15102 231 aaKnown RBP17.35■□□□□ 0.37
NUP50-202ENST00000396096 RAB41Q5JT25 222 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 ANKRD20A2Q5SQ80 823 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 ANKRD20A1Q5TYW2 823 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 ANKRD20A3Q5VUR7 823 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 OTOAQ7RTW8 1153 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 RPAINQ86UA6 219 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 GSDMBQ8TAX9 411 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 C10orf82Q8WW14 230 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 NTAN1Q96AB6 310 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 SYT15Q9BQS2 421 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 UPF3AQ9H1J1 476 aaKnown RBP17.35■□□□□ 0.37
NUP50-202ENST00000396096 KRT82Q9NSB4 513 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 MKS1Q9NXB0 559 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 SLC17A7Q9P2U7 560 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 GGT7Q9UJ14 662 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 GIT1Q9Y2X7 761 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 PTCH2Q9Y6C5 1203 aa17.35■□□□□ 0.37
NUP50-202ENST00000396096 COL4A4P53420 1690 aaPredicted RBP17.35■□□□□ 0.37
NUP50-202ENST00000396096 ZNF638Q14966 1978 aaKnown RBP17.34■□□□□ 0.37
NUP50-202ENST00000396096 FAM159BA6NKW6 160 aa17.34■□□□□ 0.37
NUP50-202ENST00000396096 MEIS3P2A8K0S8 358 aa17.34■□□□□ 0.37
NUP50-202ENST00000396096 GOLGA8RI6L899 631 aa17.34■□□□□ 0.37
NUP50-202ENST00000396096 M0QYT0 321 aa17.34■□□□□ 0.37
NUP50-202ENST00000396096 KRT37O76014 449 aa17.34■□□□□ 0.37
NUP50-202ENST00000396096 RPLP2P05387 115 aaKnown RBP17.34■□□□□ 0.37
NUP50-202ENST00000396096 THP07101 528 aa17.34■□□□□ 0.37
NUP50-202ENST00000396096 SNRPAP09012 282 aaKnown RBP17.34■□□□□ 0.37
NUP50-202ENST00000396096 C6orf222P0C671 652 aaPredicted RBP17.34■□□□□ 0.37
NUP50-202ENST00000396096 RARBP10826 455 aa17.34■□□□□ 0.37
NUP50-202ENST00000396096 IGFBP6P24592 240 aaPredicted RBP17.34■□□□□ 0.37
NUP50-202ENST00000396096 MLH1P40692 756 aa17.34■□□□□ 0.37
NUP50-202ENST00000396096 INHBEP58166 350 aa17.34■□□□□ 0.37
NUP50-202ENST00000396096 DAOAP59103 153 aa17.34■□□□□ 0.37
NUP50-202ENST00000396096 NKX3-2P78367 333 aa17.34■□□□□ 0.37
NUP50-202ENST00000396096 SARNPP82979 210 aaKnown RBP17.34■□□□□ 0.37
NUP50-202ENST00000396096 SCAPQ12770 1279 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms