RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 HHIPQ96QV1 700 aa14.59□□□□□ -0.07
HLA-DMA-203ENST00000395305 HINFPQ9BQA5 517 aa14.59□□□□□ -0.07
HLA-DMA-203ENST00000395305 NAA15Q9BXJ9 866 aaKnown RBP14.59□□□□□ -0.07
HLA-DMA-203ENST00000395305 SLC2A11Q9BYW1 496 aa14.59□□□□□ -0.07
HLA-DMA-203ENST00000395305 PLCB1Q9NQ66 1216 aa14.59□□□□□ -0.07
HLA-DMA-203ENST00000395305 TAB2Q9NYJ8 693 aa14.59□□□□□ -0.07
HLA-DMA-203ENST00000395305 PLK2Q9NYY3 685 aa14.59□□□□□ -0.07
HLA-DMA-203ENST00000395305 NCDNQ9UBB6 729 aa14.59□□□□□ -0.07
HLA-DMA-203ENST00000395305 SLC27A6Q9Y2P4 619 aa14.59□□□□□ -0.07
HLA-DMA-203ENST00000395305 LRRC10BA6NIK2 292 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 E5RJQ4 531 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 SGK1O00141 431 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 PAPSS1O43252 624 aaPredicted RBP14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 RPP40O75818 363 aaKnown RBP14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 IGLV3-27P01718 113 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 UCHL3P15374 230 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 TBX4P57082 545 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 SNX16P57768 344 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 ZNF445P59923 1031 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 YWHAZP63104 245 aaKnown RBP14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 MYL5Q02045 173 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 RAPGEF1Q13905 1077 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 MPPE1Q53F39 396 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 C10orf76Q5T2E6 689 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 NUGGCQ68CJ6 796 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 TMEM92Q6UXU6 159 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 PRR23BQ6ZRT6 265 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 CACNA2D4Q7Z3S7 1137 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 SLC47A2Q86VL8 602 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 ZNF513Q8N8E2 541 aaPredicted RBP14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 TSTD1Q8NFU3 115 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 DDI1Q8WTU0 396 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 BHMTQ93088 406 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 FAM149B1Q96BN6 582 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 P2RY11Q96G91 374 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 PPP1R13BQ96KQ4 1090 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 LSM14BQ9BX40 385 aaKnown RBP14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 STK33Q9BYT3 514 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 IRX2Q9BZI1 471 aaPredicted RBP14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 POLMQ9NP87 494 aaPredicted RBP14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 TMEM63CQ9P1W3 806 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 LIMA1Q9UHB6 759 aaKnown RBP14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 NAALADL1Q9UQQ1 740 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 FHOD1Q9Y613 1164 aa14.58□□□□□ -0.08
HLA-DMA-203ENST00000395305 PRRT4C9JH25 899 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 GFRA2O00451 464 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 CAPN9O14815 690 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 MSI1O43347 362 aaKnown RBP14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 ADAM23O75077 832 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 ALDH1A2O94788 518 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 RETP07949 1114 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 GLI1P08151 1106 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 NTSR1P30989 418 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 SLC11A2P49281 568 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 PDCLQ13371 301 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 NNTQ13423 1086 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 FKBP15Q5T1M5 1219 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 SYPL2Q5VXT5 272 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 SDE2Q6IQ49 451 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 TOGARAM2Q6ZUX3 1019 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 RASSF3Q86WH2 238 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 ANKRD20A12PQ8NF67 263 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 TMA16Q96EY4 203 aaKnown RBP14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 ZC3H10Q96K80 434 aaKnown RBP14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 NOX5Q96PH1 765 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 POPDC2Q9HBU9 364 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 GMEB2Q9UKD1 530 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 HCN2Q9UL51 889 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 TLR6Q9Y2C9 796 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 SPTBN4Q9H254 2564 aa14.57□□□□□ -0.08
HLA-DMA-203ENST00000395305 DMXL1Q9Y485 3027 aa14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 TIMM44O43615 452 aa14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 PNMA6AP0CW24 399 aaPredicted RBP14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 HNRNPLP14866 589 aaKnown RBP eCLIP14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 CYP11B1P15538 503 aa14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 CDK11BP21127 795 aaKnown RBP14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 TYRO3Q06418 890 aa14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 NCAPHQ15003 741 aa14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 E2F5Q15329 346 aa14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 LPAL2Q16609 132 aa14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 USP39Q53GS9 565 aaKnown RBP14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 EFHC1Q5JVL4 640 aa14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 PASD1Q8IV76 773 aa14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 KIAA2013Q8IYS2 634 aa14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 FAM160A2Q8N612 972 aaPredicted RBP14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 DQX1Q8TE96 717 aaKnown RBP14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 SLC39A13Q96H72 371 aa14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 PIWIL1Q96J94 861 aaKnown RBP14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 LOXL4Q96JB6 756 aa14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 SERPINB11Q96P15 392 aa14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 CPXM1Q96SM3 734 aa14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 NAT10Q9H0A0 1025 aaKnown RBP14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 ASNSD1Q9NWL6 643 aa14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 DAAM1Q9Y4D1 1078 aa14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 CEP83Q9Y592 693 aa14.56□□□□□ -0.08
HLA-DMA-203ENST00000395305 EML5Q05BV3 1969 aa14.55□□□□□ -0.08
HLA-DMA-203ENST00000395305 NPC1O15118 1278 aa14.55□□□□□ -0.08
HLA-DMA-203ENST00000395305 IRAK2O43187 625 aa14.55□□□□□ -0.08
HLA-DMA-203ENST00000395305 ACSL4O60488 711 aa14.55□□□□□ -0.08
HLA-DMA-203ENST00000395305 TSPAN3O60637 253 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms