RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 TREML1Q86YW5 311 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 APOBEC3FQ8IUX4 373 aaKnown RBP10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 C1orf127Q8N9H9 656 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 ZNF526Q8TF50 670 aaPredicted RBP10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 PRR11Q96HE9 360 aaPredicted RBP10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 SIGLEC10Q96LC7 697 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 NLRP4Q96MN2 994 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 QKIQ96PU8 341 aaKnown RBP eCLIP10.37□□□□□ -0.755e-10■■■□□ 18.8
UBE2D3-208ENST00000394803 WRNIP1Q96S55 665 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 CDT1Q9H211 546 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 GBA2Q9HCG7 927 aaPredicted RBP10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 S100A14Q9HCY8 104 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 DMAP1Q9NPF5 467 aaPredicted RBP10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 MOCS1Q9NZB8 636 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 TJP2Q9UDY2 1190 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 LCTP09848 1927 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 CCDC195A0A1B0GUA6 201 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 SPDYE16A6NNV3 312 aaPredicted RBP10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 CXorf49A8MYA2 514 aaPredicted RBP10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 E5RJQ4 531 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 CSH1P0DML2 217 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 CSH2P0DML3 217 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 PTPN9P43378 593 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 SLC1A6P48664 564 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 HK2P52789 917 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 SLC6A3Q01959 620 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 PDCD2Q16342 344 aaPredicted RBP10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 THEMIS2Q5TEJ8 643 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 MROH9Q5TGP6 573 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 CYP4V2Q6ZWL3 525 aaPredicted RBP10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 NCAPG2Q86XI2 1143 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 OR6Y1Q8NGX8 325 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 FAM172AQ8WUF8 416 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 ZBTB10Q96DT7 871 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 HPDLQ96IR7 371 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 KCNK16Q96T55 309 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 MECRQ9BV79 373 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 KLHL4Q9C0H6 718 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 Q9H521 79 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 SMYD3Q9H7B4 428 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 NGRNQ9NPE2 291 aaKnown RBP10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 RCOR3Q9P2K3 495 aaPredicted RBP10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 HESX1Q9UBX0 185 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 SIX4Q9UIU6 781 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 ADAM28Q9UKQ2 775 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 CDY2AQ9Y6F7 541 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 CDY1Q9Y6F8 540 aa10.37□□□□□ -0.75
UBE2D3-208ENST00000394803 C2orf71A6NGG8 1288 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 EIF4E1BA6NMX2 242 aaKnown RBP10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 PRR5-ARHGAP8B1AHC4 643 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 PEX1O43933 1283 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 HBP1O60381 514 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 CXCL8P10145 99 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 KITP10721 976 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 ALOX15P16050 662 aaPredicted RBP10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 PGAM1P18669 254 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 CYP2F1P24903 491 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 ARHGAP8P85298 464 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 MTM1Q13496 603 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 BMPR2Q13873 1038 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 TMEM132DQ14C87 1099 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 DPYSL2Q16555 572 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 RNF220Q5VTB9 566 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 METTL21CQ5VZV1 264 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 MBLAC2Q68D91 279 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 RASSF3Q86WH2 238 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 RIOX2Q8IUF8 465 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 PQLC3Q8N755 202 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 ACTRT2Q8TDY3 377 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 BTBD9Q96Q07 612 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 SERPINI1Q99574 410 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 TTC1Q99614 292 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 SNRNP25Q9BV90 132 aaKnown RBP10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 SMARCAD1Q9H4L7 1026 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 HACL1Q9UJ83 578 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 TSPAN16Q9UKR8 245 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 DNAJC16Q9Y2G8 782 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 WASF2Q9Y6W5 498 aa10.36□□□□□ -0.75
UBE2D3-208ENST00000394803 TTLL13PA6NNM8 815 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 LACTBL1A8MY62 500 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 KPNA7A9QM74 516 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 STAG3L1P0CL83 205 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 TUBP50607 506 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 CDH8P55286 799 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 POLE2P56282 527 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 OSTNP61366 133 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 PDE1BQ01064 536 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 CDC16Q13042 620 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 CDO1Q16878 200 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 SH3D19Q5HYK7 790 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 NOL9Q5SY16 702 aaKnown RBP10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 RASIP1Q5U651 963 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 PSTKQ8IV42 348 aaKnown RBP10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 CATSPER1Q8NEC5 780 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 PCDH19Q8TAB3 1148 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 PPP2R3BQ9Y5P8 575 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 COMMD3-BMI1R4GMX3 469 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 UTRNP46939 3433 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 A0A088AWK7 358 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 DCAF8L1A6NGE4 600 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms