RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 CDC42EP4Q9H3Q1 356 aaKnown RBP5.87□□□□□ -1.47
RFFL-202ENST00000394597 PCDH18Q9HCL0 1135 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 POLIQ9UNA4 740 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 CARD8Q9Y2G2 431 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 RBMX2Q9Y388 322 aaKnown RBP5.87□□□□□ -1.47
RFFL-202ENST00000394597 GMEB1Q9Y692 573 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 CDY2AQ9Y6F7 541 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.87□□□□□ -1.47
RFFL-202ENST00000394597 PI4K2BG5E9Z4 385 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 EDIL3O43854 480 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 FKTNO75072 461 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 RECQL4O94761 1208 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 ODC1P11926 461 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 GPD1P21695 349 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 GRIK1P39086 918 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 RAP1GDS1P52306 607 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 CDH8P55286 799 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 BCAR1P56945 870 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 BASP1P80723 227 aaKnown RBP5.87□□□□□ -1.47
RFFL-202ENST00000394597 POU5F1BQ06416 359 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 ITGA9Q13797 1035 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 PRPSAP1Q14558 356 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 AMHR2Q16671 573 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 C2CD6Q53TS8 623 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 C6orf183Q5T699 404 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 RASAL3Q86YV0 1011 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 DCP1BQ8IZD4 617 aaKnown RBP5.87□□□□□ -1.47
RFFL-202ENST00000394597 BTBD6Q96KE9 485 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 DHX35Q9H5Z1 703 aaKnown RBP5.87□□□□□ -1.47
RFFL-202ENST00000394597 CCDC134Q9H6E4 229 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 PLGRKTQ9HBL7 147 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 ATAD3AQ9NVI7 634 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 RPL26L1Q9UNX3 145 aaKnown RBP5.87□□□□□ -1.47
RFFL-202ENST00000394597 PHF24Q9UPV7 400 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 PCDHGA4Q9Y5G9 962 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 HEY1Q9Y5J3 304 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.87□□□□□ -1.47
RFFL-202ENST00000394597 MATN2O00339 956 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 COPEO14579 308 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 RIPK2O43353 540 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 PEX11AO75192 247 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 DAB1O75553 588 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 GRAP2O75791 330 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 C4BPAP04003 597 aaKnown RBP5.87□□□□□ -1.47
RFFL-202ENST00000394597 CCDC159P0C7I6 412 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 HMOX2P30519 316 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 ADSSP30520 456 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 GRM5P41594 1212 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 CHN2P52757 468 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 NDST1P52848 882 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 NME3Q13232 169 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 ITGA7Q13683 1181 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 CCDC153Q494R4 210 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 KHDC1Q4VXA5 237 aaKnown RBP5.87□□□□□ -1.47
RFFL-202ENST00000394597 EFHC2Q5JST6 749 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 BTBD8Q5XKL5 378 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 PCGF5Q86SE9 256 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 ADGRF2Q8IZF7 708 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.87□□□□□ -1.47
RFFL-202ENST00000394597 NPLOC4Q8TAT6 608 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 CALML6Q8TD86 181 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 SEMA4DQ92854 862 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 TRPV6Q9H1D0 765 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 TIMMDC1Q9NPL8 285 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 SAR1AQ9NR31 198 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 MARCOQ9UEW3 520 aaPredicted RBP5.87□□□□□ -1.47
RFFL-202ENST00000394597 TTC7AQ9ULT0 858 aaPredicted RBP5.87□□□□□ -1.47
RFFL-202ENST00000394597 MYH10P35580 1976 aa5.87□□□□□ -1.47
RFFL-202ENST00000394597 LAMB1P07942 1786 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 B4GALT4O60513 344 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 SEC24DO94855 1032 aaPredicted RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 PROSCO94903 275 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 TNFAIP8O95379 198 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 C22orf31O95567 290 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 PENKP01210 267 aaPredicted RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 NFICP08651 508 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 DARSP14868 501 aaKnown RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 CPB1P15086 417 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 CDH3P22223 829 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 LHX1P48742 406 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 ITKQ08881 620 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 PDAP1Q13442 181 aaKnown RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 AUHQ13825 339 aaKnown RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 MAPRE1Q15691 268 aaKnown RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 BBS9Q3SYG4 887 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 C11orf63Q6NUN7 778 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 SYDE1Q6ZW31 735 aaPredicted RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 PRPF39Q86UA1 669 aaKnown RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 LNX1Q8TBB1 728 aaPredicted RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 SEPT8Q92599 483 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 EME1Q96AY2 570 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 TTC25Q96NG3 672 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 GCNAQ96QF7 691 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 COLEC11Q9BWP8 271 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 FZD8Q9H461 694 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 PTTG2Q9NZH5 202 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 MYH4Q9Y623 1939 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 IQANK1A0A1B0GTG1 560 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 CCDC195A0A1B0GUA6 201 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 BTNL10A8MVZ5 291 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms