RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 PRKCHP24723 683 aa16.15■□□□□ 0.18
CHMP3-202ENST00000393773 AFMP43652 599 aa16.15■□□□□ 0.18
CHMP3-202ENST00000393773 PSEN1P49768 467 aa16.15■□□□□ 0.18
CHMP3-202ENST00000393773 STK4Q13043 487 aa16.15■□□□□ 0.18
CHMP3-202ENST00000393773 ANKS1BQ7Z6G8 1248 aa16.15■□□□□ 0.18
CHMP3-202ENST00000393773 PDZD3Q86UT5 571 aa16.15■□□□□ 0.18
CHMP3-202ENST00000393773 CACUL1Q86Y37 369 aa16.15■□□□□ 0.18
CHMP3-202ENST00000393773 MDM1Q8TC05 714 aa16.15■□□□□ 0.18
CHMP3-202ENST00000393773 TMC2Q8TDI7 906 aa16.15■□□□□ 0.18
CHMP3-202ENST00000393773 ZNF396Q96N95 335 aaPredicted RBP16.15■□□□□ 0.18
CHMP3-202ENST00000393773 CCDC86Q9H6F5 360 aaKnown RBP16.15■□□□□ 0.18
CHMP3-202ENST00000393773 APOBEC3GQ9HC16 384 aaKnown RBP16.15■□□□□ 0.18
CHMP3-202ENST00000393773 CLIC5Q9NZA1 410 aa16.15■□□□□ 0.18
CHMP3-202ENST00000393773 USP3Q9Y6I4 520 aa16.15■□□□□ 0.18
CHMP3-202ENST00000393773 SLCO1B1Q9Y6L6 691 aa16.15■□□□□ 0.18
CHMP3-202ENST00000393773 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.14■□□□□ 0.17
CHMP3-202ENST00000393773 METTL12A8MUP2 240 aa16.14■□□□□ 0.17
CHMP3-202ENST00000393773 BCAT2O15382 392 aaPredicted RBP16.14■□□□□ 0.17
CHMP3-202ENST00000393773 NR3C1P04150 777 aa16.14■□□□□ 0.17
CHMP3-202ENST00000393773 CORO1AP31146 461 aaKnown RBP16.14■□□□□ 0.17
CHMP3-202ENST00000393773 ZNF234Q14588 700 aa16.14■□□□□ 0.17
CHMP3-202ENST00000393773 COL28A1Q2UY09 1125 aa16.14■□□□□ 0.17
CHMP3-202ENST00000393773 SOWAHCQ53LP3 525 aaPredicted RBP16.14■□□□□ 0.17
CHMP3-202ENST00000393773 RESP18Q5W5W9 173 aa16.14■□□□□ 0.17
CHMP3-202ENST00000393773 TADA2BQ86TJ2 420 aa16.14■□□□□ 0.17
CHMP3-202ENST00000393773 TMPRSS6Q8IU80 811 aa16.14■□□□□ 0.17
CHMP3-202ENST00000393773 SPRYD3Q8NCJ5 442 aa16.14■□□□□ 0.17
CHMP3-202ENST00000393773 CYFIP2Q96F07 1278 aa16.14■□□□□ 0.17
CHMP3-202ENST00000393773 NT5C1AQ9BXI3 368 aa16.14■□□□□ 0.17
CHMP3-202ENST00000393773 MIR1-1HGQ9H1L0 117 aa16.14■□□□□ 0.17
CHMP3-202ENST00000393773 GAREM1Q9H706 876 aa16.14■□□□□ 0.17
CHMP3-202ENST00000393773 TM7SF3Q9NS93 570 aa16.14■□□□□ 0.17
CHMP3-202ENST00000393773 RASAL2Q9UJF2 1139 aa16.14■□□□□ 0.17
CHMP3-202ENST00000393773 CLEC4EQ9ULY5 219 aa16.14■□□□□ 0.17
CHMP3-202ENST00000393773 ZNF510Q9Y2H8 683 aa16.14■□□□□ 0.17
CHMP3-202ENST00000393773 HELZ2Q9BYK8 2649 aaKnown RBP16.14■□□□□ 0.17
CHMP3-202ENST00000393773 IKBKBO14920 756 aa16.13■□□□□ 0.17
CHMP3-202ENST00000393773 CHKAP35790 457 aa16.13■□□□□ 0.17
CHMP3-202ENST00000393773 MATKP42679 507 aa16.13■□□□□ 0.17
CHMP3-202ENST00000393773 EIF4HQ15056 248 aaKnown RBP16.13■□□□□ 0.17
CHMP3-202ENST00000393773 TMEM215Q68D42 235 aa16.13■□□□□ 0.17
CHMP3-202ENST00000393773 DBX2Q6ZNG2 339 aa16.13■□□□□ 0.17
CHMP3-202ENST00000393773 FAM217AQ8IXS0 508 aa16.13■□□□□ 0.17
CHMP3-202ENST00000393773 SETD7Q8WTS6 366 aaKnown RBP16.13■□□□□ 0.17
CHMP3-202ENST00000393773 SORCS1Q8WY21 1168 aa16.13■□□□□ 0.17
CHMP3-202ENST00000393773 PRCCQ92733 491 aaPredicted RBP16.13■□□□□ 0.17
CHMP3-202ENST00000393773 SIPA1Q96FS4 1042 aa16.13■□□□□ 0.17
CHMP3-202ENST00000393773 NIF3L1Q9GZT8 377 aa16.13■□□□□ 0.17
CHMP3-202ENST00000393773 KIAA1522Q9P206 1035 aaPredicted RBP16.13■□□□□ 0.17
CHMP3-202ENST00000393773 EIF2B4Q9UI10 523 aaKnown RBP16.13■□□□□ 0.17
CHMP3-202ENST00000393773 AGO1Q9UL18 857 aaKnown RBP16.13■□□□□ 0.17
CHMP3-202ENST00000393773 PCDHGB2Q9Y5G2 931 aa16.13■□□□□ 0.17
CHMP3-202ENST00000393773 PDXKO00764 312 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 FLRT2O43155 660 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 ACTN4O43707 911 aaKnown RBP16.12■□□□□ 0.17
CHMP3-202ENST00000393773 C7P10643 843 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 RALAP11233 206 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 CD58P19256 250 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 TRIM21P19474 475 aaKnown RBP16.12■□□□□ 0.17
CHMP3-202ENST00000393773 OXTRP30559 389 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 EFEMP1Q12805 493 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 HLA-BQ31612 363 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 PPP1R26Q5T8A7 1209 aaPredicted RBP16.12■□□□□ 0.17
CHMP3-202ENST00000393773 IL27RAQ6UWB1 636 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 TMPRSS7Q7RTY8 843 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 CPXM2Q8N436 756 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 TAS1R2Q8TE23 839 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 UCMAQ8WVF2 138 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 CDK5RAP1Q96SZ6 601 aaKnown RBP16.12■□□□□ 0.17
CHMP3-202ENST00000393773 DUSP16Q9BY84 665 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 PCED1AQ9H1Q7 454 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 CYP3A43Q9HB55 503 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 EXOC1Q9NV70 894 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 ELOVL2Q9NXB9 296 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 DKK4Q9UBT3 224 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 PCDHA7Q9UN72 937 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 RAXQ9Y2V3 346 aa16.12■□□□□ 0.17
CHMP3-202ENST00000393773 A0A1B0GVT2 93 aa16.11■□□□□ 0.17
CHMP3-202ENST00000393773 K7ELQ4 463 aaPredicted RBP16.11■□□□□ 0.17
CHMP3-202ENST00000393773 SYNCRIPO60506 623 aaKnown RBP16.11■□□□□ 0.17
CHMP3-202ENST00000393773 EPHX1P07099 455 aa16.11■□□□□ 0.17
CHMP3-202ENST00000393773 HMBSP08397 361 aa16.11■□□□□ 0.17
CHMP3-202ENST00000393773 ATXN1LP0C7T5 689 aaKnown RBP16.11■□□□□ 0.17
CHMP3-202ENST00000393773 TRIM49P0CI25 452 aa16.11■□□□□ 0.17
CHMP3-202ENST00000393773 TRIM49CP0CI26 452 aa16.11■□□□□ 0.17
CHMP3-202ENST00000393773 COG7P83436 770 aa16.11■□□□□ 0.17
CHMP3-202ENST00000393773 KMT5BQ4FZB7 885 aa16.11■□□□□ 0.17
CHMP3-202ENST00000393773 CEP135Q66GS9 1140 aa16.11■□□□□ 0.17
CHMP3-202ENST00000393773 DENND1CQ8IV53 801 aa16.11■□□□□ 0.17
CHMP3-202ENST00000393773 NUP58Q9BVL2 599 aa16.11■□□□□ 0.17
CHMP3-202ENST00000393773 IMPG2Q9BZV3 1241 aa16.11■□□□□ 0.17
CHMP3-202ENST00000393773 DCLK3Q9C098 648 aa16.11■□□□□ 0.17
CHMP3-202ENST00000393773 CIPCQ9C0C6 399 aa16.11■□□□□ 0.17
CHMP3-202ENST00000393773 SCUBE2Q9NQ36 999 aa16.11■□□□□ 0.17
CHMP3-202ENST00000393773 SERTAD1Q9UHV2 236 aa16.11■□□□□ 0.17
CHMP3-202ENST00000393773 BTBD3Q9Y2F9 522 aa16.11■□□□□ 0.17
CHMP3-202ENST00000393773 URB1O60287 2271 aaKnown RBP16.11■□□□□ 0.17
CHMP3-202ENST00000393773 MYLKQ15746 1914 aa16.1■□□□□ 0.17
CHMP3-202ENST00000393773 MAPK13O15264 365 aa16.1■□□□□ 0.17
CHMP3-202ENST00000393773 SLFN14P0C7P3 912 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms