RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 HEATR6Q6AI08 1181 aaKnown RBP19.19■□□□□ 0.66
STRADB-202ENST00000392249 OTUD6BQ8N6M0 293 aa19.19■□□□□ 0.66
STRADB-202ENST00000392249 CKAP2Q8WWK9 683 aa19.19■□□□□ 0.66
STRADB-202ENST00000392249 SMARCD1Q96GM5 515 aa19.19■□□□□ 0.66
STRADB-202ENST00000392249 RCOR3Q9P2K3 495 aaPredicted RBP19.19■□□□□ 0.66
STRADB-202ENST00000392249 PTCH2Q9Y6C5 1203 aa19.19■□□□□ 0.66
STRADB-202ENST00000392249 A0A1W2PPM1 405 aa19.18■□□□□ 0.66
STRADB-202ENST00000392249 YWHAGP61981 247 aaKnown RBP eCLIP19.18■□□□□ 0.66
STRADB-202ENST00000392249 RASA2Q15283 850 aa19.18■□□□□ 0.66
STRADB-202ENST00000392249 RAB41Q5JT25 222 aa19.18■□□□□ 0.66
STRADB-202ENST00000392249 PSTKQ8IV42 348 aaKnown RBP19.18■□□□□ 0.66
STRADB-202ENST00000392249 VPS52Q8N1B4 723 aa19.18■□□□□ 0.66
STRADB-202ENST00000392249 HHIPL1Q96JK4 782 aa19.18■□□□□ 0.66
STRADB-202ENST00000392249 SMC6Q96SB8 1091 aa19.18■□□□□ 0.66
STRADB-202ENST00000392249 ELAC2Q9BQ52 826 aaKnown RBP19.18■□□□□ 0.66
STRADB-202ENST00000392249 CNGB3Q9NQW8 809 aa19.18■□□□□ 0.66
STRADB-202ENST00000392249 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.18■□□□□ 0.66
STRADB-202ENST00000392249 HHLA1C9JL84 531 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 GCATO75600 419 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 NCAM1P13591 858 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 VAV1P15498 845 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 GRIK3Q13003 919 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 TRIM71Q2Q1W2 868 aaKnown RBP19.17■□□□□ 0.66
STRADB-202ENST00000392249 YTHDF3Q7Z739 585 aaKnown RBP19.17■□□□□ 0.66
STRADB-202ENST00000392249 CAND1Q86VP6 1230 aaKnown RBP19.17■□□□□ 0.66
STRADB-202ENST00000392249 TFB1MQ8WVM0 346 aaKnown RBP19.17■□□□□ 0.66
STRADB-202ENST00000392249 PGBD4Q96DM1 585 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 OLFM3Q96PB7 478 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 LGMNQ99538 433 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 NSRP1Q9H0G5 558 aaKnown RBP19.17■□□□□ 0.66
STRADB-202ENST00000392249 FGFR1OP2Q9NVK5 253 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 SENP1Q9P0U3 644 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 SAMD15Q9P1V8 674 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 FETUBQ9UGM5 382 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 MYO18AQ92614 2054 aaKnown RBP19.17■□□□□ 0.66
STRADB-202ENST00000392249 TCRBV9S1A1TA0A576 114 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 F8W810 466 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 H3BRJ5 948 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 DGKIO75912 1065 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 TSHRP16473 764 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 YY1P25490 414 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 TUSC3Q13454 348 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 NUGGCQ68CJ6 796 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 ADGRD1Q6QNK2 874 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 CD300LGQ6UXG3 332 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 PIGWQ7Z7B1 504 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 METTL23Q86XA0 190 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 CCDC197Q8NCU1 140 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 CFAP36Q96G28 342 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 PAIP2Q9BPZ3 127 aaKnown RBP19.17■□□□□ 0.66
STRADB-202ENST00000392249 DHRS4Q9BTZ2 278 aa19.17■□□□□ 0.66
STRADB-202ENST00000392249 LTFP02788 710 aa19.16■□□□□ 0.66
STRADB-202ENST00000392249 ITGB1P05556 798 aa19.16■□□□□ 0.66
STRADB-202ENST00000392249 BDNFP23560 247 aa19.16■□□□□ 0.66
STRADB-202ENST00000392249 MSH2P43246 934 aa19.16■□□□□ 0.66
STRADB-202ENST00000392249 MAGEA6P43360 314 aa19.16■□□□□ 0.66
STRADB-202ENST00000392249 LIG3P49916 1009 aa19.16■□□□□ 0.66
STRADB-202ENST00000392249 ACLYP53396 1101 aa19.16■□□□□ 0.66
STRADB-202ENST00000392249 WDR4P57081 412 aaKnown RBP19.16■□□□□ 0.66
STRADB-202ENST00000392249 RNF180Q86T96 592 aa19.16■□□□□ 0.66
STRADB-202ENST00000392249 DCAKDQ8WVC6 231 aa19.16■□□□□ 0.66
STRADB-202ENST00000392249 HTR3CQ8WXA8 447 aa19.16■□□□□ 0.66
STRADB-202ENST00000392249 EDEM1Q92611 657 aa19.16■□□□□ 0.66
STRADB-202ENST00000392249 TGS1Q96RS0 853 aaKnown RBP19.16■□□□□ 0.66
STRADB-202ENST00000392249 CYTH2Q99418 400 aa19.16■□□□□ 0.66
STRADB-202ENST00000392249 WDR6Q9NNW5 1121 aaKnown RBP19.16■□□□□ 0.66
STRADB-202ENST00000392249 ANLNQ9NQW6 1124 aa19.16■□□□□ 0.66
STRADB-202ENST00000392249 F5H423 210 aaPredicted RBP19.16■□□□□ 0.66
STRADB-202ENST00000392249 PRPF4O43172 522 aaKnown RBP eCLIP19.16■□□□□ 0.66
STRADB-202ENST00000392249 TOMM70O94826 608 aa19.16■□□□□ 0.66
STRADB-202ENST00000392249 ZKSCAN8Q15776 578 aaPredicted RBP19.16■□□□□ 0.66
STRADB-202ENST00000392249 INTS6LQ5JSJ4 861 aaKnown RBP19.16■□□□□ 0.66
STRADB-202ENST00000392249 C4orf22Q6V702 233 aa19.16■□□□□ 0.66
STRADB-202ENST00000392249 ECHDC2Q86YB7 292 aa19.16■□□□□ 0.66
STRADB-202ENST00000392249 SGSM3Q96HU1 749 aa19.16■□□□□ 0.66
STRADB-202ENST00000392249 TMEM209Q96SK2 561 aa19.16■□□□□ 0.66
STRADB-202ENST00000392249 ACBD6Q9BR61 282 aa19.16■□□□□ 0.66
STRADB-202ENST00000392249 FRMD8Q9BZ67 464 aaPredicted RBP19.16■□□□□ 0.66
STRADB-202ENST00000392249 TMLHEQ9NVH6 421 aa19.16■□□□□ 0.66
STRADB-202ENST00000392249 FAM72CH0Y354 149 aa19.15■□□□□ 0.66
STRADB-202ENST00000392249 I6L893 689 aaPredicted RBP19.15■□□□□ 0.66
STRADB-202ENST00000392249 EEF2KO00418 725 aaKnown RBP19.15■□□□□ 0.66
STRADB-202ENST00000392249 AMHP03971 560 aa19.15■□□□□ 0.66
STRADB-202ENST00000392249 KRT4P19013 534 aa19.15■□□□□ 0.66
STRADB-202ENST00000392249 ADRA1BP35368 520 aa19.15■□□□□ 0.66
STRADB-202ENST00000392249 NOGQ13253 232 aa19.15■□□□□ 0.66
STRADB-202ENST00000392249 KBTBD12Q3ZCT8 623 aa19.15■□□□□ 0.66
STRADB-202ENST00000392249 FAM72AQ5TYM5 149 aa19.15■□□□□ 0.66
STRADB-202ENST00000392249 FAM72DQ6L9T8 149 aa19.15■□□□□ 0.66
STRADB-202ENST00000392249 DENND5BQ6ZUT9 1274 aa19.15■□□□□ 0.66
STRADB-202ENST00000392249 BZW1Q7L1Q6 419 aaKnown RBP19.15■□□□□ 0.66
STRADB-202ENST00000392249 BHLHA9Q7RTU4 235 aa19.15■□□□□ 0.66
STRADB-202ENST00000392249 FAM72BQ86X60 149 aa19.15■□□□□ 0.66
STRADB-202ENST00000392249 OR10T2Q8NGX3 314 aa19.15■□□□□ 0.66
STRADB-202ENST00000392249 CSNK1G1Q9HCP0 422 aa19.15■□□□□ 0.66
STRADB-202ENST00000392249 DDIT4Q9NX09 232 aa19.15■□□□□ 0.66
STRADB-202ENST00000392249 CYP11A1P05108 521 aa19.15■□□□□ 0.66
STRADB-202ENST00000392249 CA4P22748 312 aa19.15■□□□□ 0.66
STRADB-202ENST00000392249 RPA3P35244 121 aaPredicted RBP19.15■□□□□ 0.66
STRADB-202ENST00000392249 AP1B1Q10567 949 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms