RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 TRIP4Q15650 581 aaPredicted RBP17.72■□□□□ 0.43
ERCC2-202ENST00000391942 PEX26Q7Z412 305 aa17.72■□□□□ 0.43
ERCC2-202ENST00000391942 SLFN11Q7Z7L1 901 aa17.72■□□□□ 0.43
ERCC2-202ENST00000391942 SYCE1Q8N0S2 351 aa17.72■□□□□ 0.43
ERCC2-202ENST00000391942 ST13P5Q8NFI4 369 aaPredicted RBP17.72■□□□□ 0.43
ERCC2-202ENST00000391942 TRIM58Q8NG06 486 aa17.72■□□□□ 0.43
ERCC2-202ENST00000391942 FGF13Q92913 245 aa17.72■□□□□ 0.43
ERCC2-202ENST00000391942 HLA-CQ95604 372 aa17.72■□□□□ 0.43
ERCC2-202ENST00000391942 PGAP3Q96FM1 320 aaPredicted RBP17.72■□□□□ 0.43
ERCC2-202ENST00000391942 PEBP4Q96S96 227 aa17.72■□□□□ 0.43
ERCC2-202ENST00000391942 KLF16Q9BXK1 252 aaPredicted RBP17.72■□□□□ 0.43
ERCC2-202ENST00000391942 TMPRSS4Q9NRS4 437 aa17.72■□□□□ 0.43
ERCC2-202ENST00000391942 TLR6Q9Y2C9 796 aa17.72■□□□□ 0.43
ERCC2-202ENST00000391942 BRWD1Q9NSI6 2320 aa17.72■□□□□ 0.43
ERCC2-202ENST00000391942 EYSQ5T1H1 3165 aa17.72■□□□□ 0.43
ERCC2-202ENST00000391942 SCAMP3O14828 347 aaKnown RBP17.71■□□□□ 0.43
ERCC2-202ENST00000391942 MOCS2O96007 188 aaPredicted RBP17.71■□□□□ 0.43
ERCC2-202ENST00000391942 SP100P23497 879 aaPredicted RBP17.71■□□□□ 0.43
ERCC2-202ENST00000391942 IL1R2P27930 398 aa17.71■□□□□ 0.43
ERCC2-202ENST00000391942 SLC1A1P43005 524 aa17.71■□□□□ 0.43
ERCC2-202ENST00000391942 CXCR3P49682 368 aa17.71■□□□□ 0.43
ERCC2-202ENST00000391942 DNA2P51530 1060 aa17.71■□□□□ 0.43
ERCC2-202ENST00000391942 ZXDBP98169 803 aa17.71■□□□□ 0.43
ERCC2-202ENST00000391942 TXNRD3NBQ6F5E7 133 aa17.71■□□□□ 0.43
ERCC2-202ENST00000391942 NT5DC3Q86UY8 548 aa17.71■□□□□ 0.43
ERCC2-202ENST00000391942 CCDC185Q8N715 623 aa17.71■□□□□ 0.43
ERCC2-202ENST00000391942 ZSCAN18Q8TBC5 510 aaPredicted RBP17.71■□□□□ 0.43
ERCC2-202ENST00000391942 WBP2Q969T9 261 aa17.71■□□□□ 0.43
ERCC2-202ENST00000391942 ACSF2Q96CM8 615 aaPredicted RBP17.71■□□□□ 0.43
ERCC2-202ENST00000391942 ZFRQ96KR1 1074 aaKnown RBP17.71■□□□□ 0.43
ERCC2-202ENST00000391942 FCRL2Q96LA5 508 aaPredicted RBP17.71■□□□□ 0.43
ERCC2-202ENST00000391942 C16orf45Q96MC5 204 aaPredicted RBP17.71■□□□□ 0.43
ERCC2-202ENST00000391942 AMFRQ9UKV5 643 aa17.71■□□□□ 0.43
ERCC2-202ENST00000391942 USP18Q9UMW8 372 aa17.71■□□□□ 0.43
ERCC2-202ENST00000391942 CCL26Q9Y258 94 aa17.71■□□□□ 0.43
ERCC2-202ENST00000391942 PRPSAP2O60256 369 aa17.7■□□□□ 0.42
ERCC2-202ENST00000391942 PRAMEF12O95522 483 aa17.7■□□□□ 0.42
ERCC2-202ENST00000391942 GBP2P32456 591 aaPredicted RBP17.7■□□□□ 0.42
ERCC2-202ENST00000391942 PCK1P35558 622 aa17.7■□□□□ 0.42
ERCC2-202ENST00000391942 SLC7A9P82251 487 aa17.7■□□□□ 0.42
ERCC2-202ENST00000391942 SLC25A11Q02978 314 aaKnown RBP17.7■□□□□ 0.42
ERCC2-202ENST00000391942 EIF4EBP2Q13542 120 aaPredicted RBP17.7■□□□□ 0.42
ERCC2-202ENST00000391942 SMTNL2Q2TAL5 461 aa17.7■□□□□ 0.42
ERCC2-202ENST00000391942 KCNT1Q5JUK3 1230 aa17.7■□□□□ 0.42
ERCC2-202ENST00000391942 MAFAQ8NHW3 353 aaPredicted RBP17.7■□□□□ 0.42
ERCC2-202ENST00000391942 USP13Q92995 863 aaPredicted RBP17.7■□□□□ 0.42
ERCC2-202ENST00000391942 MYADMQ96S97 322 aa17.7■□□□□ 0.42
ERCC2-202ENST00000391942 TKTL2Q9H0I9 626 aa17.7■□□□□ 0.42
ERCC2-202ENST00000391942 WDCPQ9H6R7 721 aa17.7■□□□□ 0.42
ERCC2-202ENST00000391942 ANLNQ9NQW6 1124 aa17.7■□□□□ 0.42
ERCC2-202ENST00000391942 KLHL11Q9NVR0 708 aa17.7■□□□□ 0.42
ERCC2-202ENST00000391942 GPATCH2LQ9NWQ4 482 aa17.7■□□□□ 0.42
ERCC2-202ENST00000391942 HBS1LQ9Y450 684 aaKnown RBP17.7■□□□□ 0.42
ERCC2-202ENST00000391942 HELZP42694 1942 aaKnown RBP17.7■□□□□ 0.42
ERCC2-202ENST00000391942 DENND4AQ7Z401 1863 aa17.7■□□□□ 0.42
ERCC2-202ENST00000391942 STC2O76061 302 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 PFKLP17858 780 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 CCR1P32246 355 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 MARCKSL1P49006 195 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 COG7P83436 770 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 NNTQ13423 1086 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 HADHQ16836 314 aaKnown RBP17.69■□□□□ 0.42
ERCC2-202ENST00000391942 ATP13A4Q4VNC1 1196 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 ARID3BQ8IVW6 561 aaPredicted RBP17.69■□□□□ 0.42
ERCC2-202ENST00000391942 SUSD6Q92537 303 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 HSPH1Q92598 858 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 SLC39A13Q96H72 371 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 NECTIN4Q96NY8 510 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 WDR24Q96S15 920 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 MAGEB5Q9BZ81 275 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 CFAP97Q9P2B7 532 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 CDH7Q9ULB5 785 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 I6L893 689 aaPredicted RBP17.69■□□□□ 0.42
ERCC2-202ENST00000391942 LEFTY2O00292 366 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 ENC1O14682 589 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 MBTPS2O43462 519 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 IGLV3-27P01718 113 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 APOEP02649 317 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 KPNA1P52294 538 aaPredicted RBP17.69■□□□□ 0.42
ERCC2-202ENST00000391942 SMAD4Q13485 552 aaKnown RBP17.69■□□□□ 0.42
ERCC2-202ENST00000391942 FAM78AQ5JUQ0 283 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 ZFYVE27Q5T4F4 411 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 CYP4V2Q6ZWL3 525 aaPredicted RBP17.69■□□□□ 0.42
ERCC2-202ENST00000391942 ADAMTS19Q8TE59 1207 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 SH3RF2Q8TEC5 729 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 KRT35Q92764 455 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 PLD4Q96BZ4 506 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 NCAPGQ9BPX3 1015 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 SNRNP25Q9BV90 132 aaKnown RBP17.69■□□□□ 0.42
ERCC2-202ENST00000391942 PRDM6Q9NQX0 595 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 TDP1Q9NUW8 608 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.69■□□□□ 0.42
ERCC2-202ENST00000391942 XPO7Q9UIA9 1087 aaKnown RBP17.69■□□□□ 0.42
ERCC2-202ENST00000391942 ARHGAP26Q9UNA1 814 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 SNX10Q9Y5X0 201 aa17.69■□□□□ 0.42
ERCC2-202ENST00000391942 SOBPA7XYQ1 873 aa17.68■□□□□ 0.42
ERCC2-202ENST00000391942 RARAP10276 462 aa17.68■□□□□ 0.42
ERCC2-202ENST00000391942 CORO1AP31146 461 aaKnown RBP17.68■□□□□ 0.42
ERCC2-202ENST00000391942 ADRA1BP35368 520 aa17.68■□□□□ 0.42
ERCC2-202ENST00000391942 GGCXP38435 758 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms