RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 SCUBE3Q8IX30 993 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 C1orf131Q8NDD1 294 aaKnown RBP13.22□□□□□ -0.29
GGPS1-203ENST00000391855 NEK11Q8NG66 645 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 DQX1Q8TE96 717 aaKnown RBP13.22□□□□□ -0.29
GGPS1-203ENST00000391855 CLEC4CQ8WTT0 213 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 AZIN2Q96A70 460 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 PCMTD1Q96MG8 357 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-203ENST00000391855 SPAG5Q96R06 1193 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 DDX50Q9BQ39 737 aaKnown RBP13.22□□□□□ -0.29
GGPS1-203ENST00000391855 FUCA2Q9BTY2 467 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 FAM207AQ9NSI2 230 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-203ENST00000391855 DNAJC17Q9NVM6 304 aaKnown RBP13.22□□□□□ -0.29
GGPS1-203ENST00000391855 CYTH4Q9UIA0 394 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 TBC1D3BA6NDS4 549 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 HSF2BPO75031 334 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 PNMA6AP0CW24 399 aaPredicted RBP13.21□□□□□ -0.3
GGPS1-203ENST00000391855 SLC6A11P48066 632 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 SLC11A2P49281 568 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 DGKGP49619 791 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 CLCN6P51797 869 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 TBX4P57082 545 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 POLR2FP61218 127 aaKnown RBP13.21□□□□□ -0.3
GGPS1-203ENST00000391855 YWHAZP63104 245 aaKnown RBP13.21□□□□□ -0.3
GGPS1-203ENST00000391855 TPM4P67936 248 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 UBXN1Q04323 297 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 DMC1Q14565 340 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 FILIP1LQ4L180 1135 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 MPPE1Q53F39 396 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 EOGTQ5NDL2 527 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 PKN3Q6P5Z2 889 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 WDR5BQ86VZ2 330 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 PASD1Q8IV76 773 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 WDTC1Q8N5D0 677 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 NAT16Q8N8M0 369 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 ZNF557Q8N988 423 aaPredicted RBP13.21□□□□□ -0.3
GGPS1-203ENST00000391855 EPS8L1Q8TE68 723 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 CPXM1Q96SM3 734 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 SLC2A11Q9BYW1 496 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 HSD3B7Q9H2F3 369 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 EPC1Q9H2F5 836 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 SYNCQ9H7C4 482 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 TMEM51Q9NW97 253 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 MMP17Q9ULZ9 603 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 TLR6Q9Y2C9 796 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 SLC27A6Q9Y2P4 619 aa13.21□□□□□ -0.3
GGPS1-203ENST00000391855 IRAK2O43187 625 aa13.2□□□□□ -0.3
GGPS1-203ENST00000391855 MSI1O43347 362 aaKnown RBP13.2□□□□□ -0.3
GGPS1-203ENST00000391855 APBB3O95704 486 aa13.2□□□□□ -0.3
GGPS1-203ENST00000391855 FYNP06241 537 aa13.2□□□□□ -0.3
GGPS1-203ENST00000391855 SOX5P35711 763 aa13.2□□□□□ -0.3
GGPS1-203ENST00000391855 SCNN1AP37088 669 aa13.2□□□□□ -0.3
GGPS1-203ENST00000391855 STAT1P42224 750 aa13.2□□□□□ -0.3
GGPS1-203ENST00000391855 JAM2P57087 298 aa13.2□□□□□ -0.3
GGPS1-203ENST00000391855 MTA1Q13330 715 aa13.2□□□□□ -0.3
GGPS1-203ENST00000391855 PTPN20Q4JDL3 420 aa13.2□□□□□ -0.3
GGPS1-203ENST00000391855 C10orf76Q5T2E6 689 aa13.2□□□□□ -0.3
GGPS1-203ENST00000391855 ADGRF1Q5T601 910 aa13.2□□□□□ -0.3
GGPS1-203ENST00000391855 FYB2Q5VWT5 728 aa13.2□□□□□ -0.3
GGPS1-203ENST00000391855 ASCL5Q7RTU5 278 aa13.2□□□□□ -0.3
GGPS1-203ENST00000391855 APTXQ7Z2E3 356 aaKnown RBP13.2□□□□□ -0.3
GGPS1-203ENST00000391855 DHX40Q8IX18 779 aaKnown RBP13.2□□□□□ -0.3
GGPS1-203ENST00000391855 ZNF397Q8NF99 534 aaPredicted RBP13.2□□□□□ -0.3
GGPS1-203ENST00000391855 RRN3Q9NYV6 651 aa13.2□□□□□ -0.3
GGPS1-203ENST00000391855 FBXO10Q9UK96 956 aa13.2□□□□□ -0.3
GGPS1-203ENST00000391855 STARD13Q9Y3M8 1113 aa13.2□□□□□ -0.3
GGPS1-203ENST00000391855 SYCE3A1L190 88 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 TYW5A2RUC4 315 aaKnown RBP13.19□□□□□ -0.3
GGPS1-203ENST00000391855 APOEP02649 317 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 PYGBP11216 843 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 ATP1A3P13637 1013 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 KIR2DL1P43626 348 aaPredicted RBP13.19□□□□□ -0.3
GGPS1-203ENST00000391855 FNTBP49356 437 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 DGKEP52429 567 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 SEC13P55735 322 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 CDK17Q00537 523 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 CDR2Q01850 454 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 C2orf27AQ580R0 203 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 OR6B2Q6IFH4 312 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 TRIM72Q6ZMU5 477 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 SLC26A9Q7LBE3 791 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 TAC4Q86UU9 113 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 TSTD1Q8NFU3 115 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 DDI1Q8WTU0 396 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 DDX1Q92499 740 aaKnown RBP13.19□□□□□ -0.3
GGPS1-203ENST00000391855 SLC39A13Q96H72 371 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 SLC2A13Q96QE2 648 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 NLRC4Q9NPP4 1024 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 EBF1Q9UH73 591 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 RAB23Q9ULC3 237 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 NAALADL1Q9UQQ1 740 aa13.19□□□□□ -0.3
GGPS1-203ENST00000391855 MYOFQ9NZM1 2061 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 GFRA2O00451 464 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 NPC1O15118 1278 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 ACSL4O60488 711 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 DAB1O75553 588 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 ALDH1A2O94788 518 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 GFPT2O94808 682 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 TRUB2O95900 331 aaKnown RBP13.18□□□□□ -0.3
GGPS1-203ENST00000391855 IGLV3-25P01717 112 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 CCDC172P0C7W6 258 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms