RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 CHPFQ8IZ52 775 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 NGDNQ8NEJ9 315 aaKnown RBP1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 WDR83Q9BRX9 315 aaKnown RBP1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 GFRA4Q9GZZ7 299 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 CCDC8Q9H0W5 538 aaPredicted RBP1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 DDX31Q9H8H2 851 aaKnown RBP1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 ARMT1Q9H993 441 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 PLAC1Q9HBJ0 212 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 ZSCAN32Q9NX65 697 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 NKX1-2Q9UD57 310 aaPredicted RBP1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 UTS2RQ9UKP6 389 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 TRHDEQ9UKU6 1024 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 CKAP5Q14008 2032 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 PLSCR5A0PG75 271 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 SLC16A5O15375 505 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 RGS14O43566 566 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 RGS10O43665 173 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 BAG4O95429 457 aaKnown RBP1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 POU2F2P09086 479 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 PARP1P09874 1014 aaKnown RBP1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 GLIPR1P48060 266 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 RFX5P48382 616 aaPredicted RBP1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 NOVP48745 357 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 PGDP52209 483 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 AGFG1P52594 562 aaKnown RBP1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 ARFIP2P53365 341 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 POU3F1Q03052 451 aaPredicted RBP1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 CCDC15Q0P6D6 951 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 TRAF1Q13077 416 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 GPS2Q13227 327 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 PGS1Q32NB8 556 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 CACHD1Q5VU97 1274 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 GRHL2Q6ISB3 625 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 Q6ZTK2 550 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 KRTAP5-5Q701N2 237 aaPredicted RBP1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 USP49Q70CQ1 688 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 GPSM1Q86YR5 675 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 MPP5Q8N3R9 675 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 ADAMTS14Q8WXS8 1223 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 CELF1Q92879 486 aaKnown RBP1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 PKP4Q99569 1192 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 SAP30LQ9HAJ7 183 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 XPNPEP3Q9NQH7 507 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 PCDHAC2Q9Y5I4 1007 aa1.75□□□□□ -2.13
RNU6-239P-201ENST00000390990 ZNF335Q9H4Z2 1342 aaPredicted RBP1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 IGKV3D-20A0A0C4DH25 116 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 A0A1B0GU03 582 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 BMPR1BO00238 502 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 BTN3A1O00481 513 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 PRYO14603 147 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 MDM4O15151 490 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 SPRY3O43610 288 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 BUB3O43684 328 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 DTNBO60941 627 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 LCATP04180 440 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 WNT1P04628 370 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 TMIGD3P0DMS9 266 aaPredicted RBP1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 FCGR1AP12314 374 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 ZNF12P17014 697 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 NTSR1P30989 418 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 VPS41P49754 854 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 ITGA8P53708 1063 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 RAE1P78406 368 aaKnown RBP1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 GAB1Q13480 694 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 C14orf177Q52M58 125 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 PARM1Q6UWI2 310 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 DSTYKQ6XUX3 929 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 CREB3L2Q70SY1 520 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 H1FNTQ75WM6 255 aaPredicted RBP1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 CATIPQ7Z7H3 387 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 UEVLDQ8IX04 471 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 RFLNBQ8N5W9 214 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 ZNF485Q8NCK3 441 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 CENPIQ92674 756 aaPredicted RBP1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 CDK5RAP3Q96JB5 506 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 VPS50Q96JG6 964 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 DRC1Q96MC2 740 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 CINPQ9BW66 212 aaPredicted RBP1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 TRIM54Q9BYV2 358 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 MAP6D1Q9H9H5 199 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 SMURF2Q9HAU4 748 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 IGSF9Q9P2J2 1179 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 STAP2Q9UGK3 403 aa1.74□□□□□ -2.13
RNU6-239P-201ENST00000390990 LOC102724159A0A0B4J2E5 919 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 H7C4K7 107 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 PHGDHO43175 533 aaKnown RBP1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 KCNQ3O43525 872 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 RRP9O43818 475 aaKnown RBP1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 GLUD1P00367 558 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 ALDH2P05091 517 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 CYP1A2P05177 515 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 PRSS2P07478 247 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 SNRNP70P08621 437 aaKnown RBP1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 F7P08709 466 aaPredicted RBP1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 NPR1P16066 1061 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 HOXD3P31249 432 aaPredicted RBP1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 GLUD2P49448 558 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 ZNF84P51523 738 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 EIF4A1P60842 406 aaKnown RBP1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 SEC61A1P61619 476 aaKnown RBP1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms