RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 DTNBO60941 627 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 ERAL1O75616 437 aaKnown RBP2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 ENDOD1O94919 500 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 RTN3O95197 1032 aaPredicted RBP2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 HSPA4LO95757 839 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 CSF1P09603 554 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 HNRNPA1P09651 372 aaKnown RBP eCLIP2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 PRR35P0CG20 571 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 ALAS1P13196 640 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 MTHFD2P13995 350 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 IL11P20809 199 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 MALP21145 153 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 DRD4P21917 467 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 MUTP22033 750 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 CST5P28325 142 aaPredicted RBP2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 PRDX5P30044 214 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 HADHAP40939 763 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 PHKA1P46020 1223 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 ANXA11P50995 505 aaKnown RBP2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 COPAP53621 1224 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 LINC00205P59089 165 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 EXOSC9Q06265 439 aaKnown RBP2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 CTBP1Q13363 440 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 FHL3Q13643 280 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 UTP14CQ5TAP6 766 aaKnown RBP2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 ZNF449Q6P9G9 518 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 ZDHHC24Q6UX98 284 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 CATSPERGQ6ZRH7 1159 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 BBS12Q6ZW61 710 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 B4GALNT4Q76KP1 1039 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 RRAGAQ7L523 313 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 ADGRA1Q86SQ6 560 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 C2CD5Q86YS7 1000 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 RASAL3Q86YV0 1011 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 GALNT13Q8IUC8 556 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 RHOT1Q8IXI2 618 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 TEX11Q8IYF3 940 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 C3orf20Q8ND61 904 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 AFG1LQ8WV93 481 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 TRIM63Q969Q1 353 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 HDAC10Q969S8 669 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 NMD3Q96D46 503 aaKnown RBP2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 EID2BQ96D98 161 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 CYFIP2Q96F07 1278 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 LRRC46Q96FV0 321 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 CDHR1Q96JP9 859 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 C7orf26Q96N11 449 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 LBHD1Q9BQE6 289 aaPredicted RBP2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 ARHGAP39Q9C0H5 1083 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 TWSG1Q9GZX9 223 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 SPRTNQ9H040 489 aaPredicted RBP2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 C11orf54Q9H0W9 315 aaPredicted RBP2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 MRPL46Q9H2W6 279 aaKnown RBP2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 SMOC2Q9H3U7 446 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 ACAD9Q9H845 621 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 SERTAD4Q9NUC0 356 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 RGL1Q9NZL6 768 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 ADD3Q9UEY8 706 aaKnown RBP2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 SLC13A4Q9UKG4 626 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 AGAP1Q9UPQ3 857 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 MTO1Q9Y2Z2 717 aaKnown RBP2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 SNX5Q9Y5X3 404 aa2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.42□□□□□ -2.02
SNORA40.19-201ENST00000390846 GPRASP1Q5JY77 1395 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 hCG_1807616A0A1W2PRN6 198 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 FAM90A18PA6NE21 464 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 FAM90A16PA6NEW6 464 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 FAM90A9PA6NNJ1 464 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 FAM90A5PA8MXJ8 464 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 H3BNC9 293 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 KIAA0391O15091 583 aaKnown RBP2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 KCNQ3O43525 872 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 DNPH1O43598 174 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 DKC1O60832 514 aaKnown RBP eCLIP2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 ZBED4O75132 1171 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 ANXA2P07355 339 aaKnown RBP2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 CHRM2P08172 466 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 SLC3A2P08195 630 aaKnown RBP2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 FAM90A15PP0C7V4 464 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 FAM90A14PP0C7W9 464 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 PECAM1P16284 738 aaPredicted RBP2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 RPL17P18621 184 aaKnown RBP2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 RXRAP19793 462 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 GPD1P21695 349 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 KLRK1P26718 216 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 ABCD3P28288 659 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 CTGFP29279 349 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 SOX10P56693 466 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 RPS7P62081 194 aaKnown RBP2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 POU6F2P78424 691 aaPredicted RBP2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 SP2Q02086 613 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 DDR1Q08345 913 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 TRPC3Q13507 836 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 PLCB4Q15147 1175 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 ETFDHQ16134 617 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 ASIC2Q16515 512 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 SUPT20HL1Q3ZLR7 823 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 CTXN3Q4LDR2 81 aa2.41□□□□□ -2.02
SNORA40.19-201ENST00000390846 CCDC157Q569K6 752 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms