RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 AOPEPQ8N6M6 819 aa-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 CCHCR1Q8TD31 782 aa-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 ZNF473Q8WTR7 871 aaKnown RBP-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 EME1Q96AY2 570 aa-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 BICD1Q96G01 975 aa-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 ZNF496Q96IT1 587 aaPredicted RBP-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 CNOT6LQ96LI5 555 aaKnown RBP-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 C17orf77Q96MU5 243 aa-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 FCRL5Q96RD9 977 aa-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 BARD1Q99728 777 aaKnown RBP-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 WDR83Q9BRX9 315 aaKnown RBP-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 FSD1Q9BTV5 496 aa-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 WNT8AQ9H1J5 351 aa-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 DHX36Q9H2U1 1008 aaKnown RBP-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 UBTD1Q9HAC8 227 aa-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 FBRSL1Q9HCM7 1045 aaKnown RBP-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 GAR1Q9NY12 217 aaKnown RBP-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 ACTR10Q9NZ32 417 aa-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 CDY2AQ9Y6F7 541 aa-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 HMCN2Q8NDA2 5059 aa-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 MEGF8Q7Z7M0 2845 aa-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 TENM2Q9NT68 2774 aa-0.26□□□□□ -2.45
RNU6-540P-201ENST00000384622 E9PLN8 166 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 VPS4BO75351 444 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 HOXA7P31268 230 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 RANGAP1P46060 587 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 RASSF2P50749 326 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 MECP2P51608 486 aaKnown RBP-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 ZNF132P52740 706 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 LIMK2P53671 638 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 SUMO1P63165 101 aaKnown RBP-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 MTM1Q13496 603 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 KPNB1Q14974 876 aaKnown RBP-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 DCST1Q5T197 706 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 TMEM108Q6UXF1 575 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 PHF10Q8WUB8 498 aaKnown RBP-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 SOCS4Q8WXH5 440 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 THAP4Q8WY91 577 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 TAAR8Q969N4 342 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 ZBTB45Q96K62 511 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 C18orf12Q96KH6 178 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 MAGEB10Q96LZ2 347 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 IPO9Q96P70 1041 aaKnown RBP-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 PRR25Q96S07 402 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 VKORC1Q9BQB6 163 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 AAMDCQ9H7C9 122 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 MOV10Q9HCE1 1003 aaKnown RBP-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 ARL8BQ9NVJ2 186 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 JKAMPQ9P055 326 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 CPNE7Q9UBL6 633 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 SLC45A2Q9UMX9 530 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 SLC8A2Q9UPR5 921 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 B3GNT3Q9Y2A9 372 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 ZBTB1Q9Y2K1 713 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 SPO11Q9Y5K1 396 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 NAV2Q8IVL1 2488 aa-0.27□□□□□ -2.45
RNU6-540P-201ENST00000384622 UNC79Q9P2D8 2635 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 HECTD1Q9ULT8 2610 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 LINC01553A4QN01 128 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 EYA2O00167 538 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 RRHO14718 337 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 PATE4P0C8F1 98 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 RPS2P15880 293 aaKnown RBP-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 KCNA6P17658 529 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 DDCP20711 480 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 RPS6KB1P23443 525 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 MARK3P27448 753 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 GCLCP48506 637 aaPredicted RBP-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 NASPP49321 788 aaPredicted RBP-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 LYZP61626 148 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 MFSD13AQ14CX5 517 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 ZNF394Q53GI3 561 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 DENND2CQ68D51 928 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 DPY19L3Q6ZPD9 716 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 GAS2L3Q86XJ1 694 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 LINC01465Q8N7H1 131 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 KBTBD3Q8NAB2 608 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 OR13A1Q8NGR1 328 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 CYFIP2Q96F07 1278 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 LRR1Q96L50 414 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 PUS7Q96PZ0 661 aaKnown RBP-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 CDC6Q99741 560 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 HTATIP2Q9BUP3 242 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 ZMAT4Q9H898 229 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 SLAMF7Q9NQ25 335 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 CCM2LQ9NUG4 571 aaPredicted RBP-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 ETAA1Q9NY74 926 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 LPAR3Q9UBY5 353 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 HDAC9Q9UKV0 1011 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 SSX2IPQ9Y2D8 614 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 PCDHGB7Q9Y5F8 929 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 EPPK1P58107 5090 aaKnown RBP-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 ZANQ9Y493 2812 aa-0.28□□□□□ -2.45
RNU6-540P-201ENST00000384622 ACANP16112 2415 aa-0.29□□□□□ -2.46
RNU6-540P-201ENST00000384622 IGLV5-52A0A0A0MRZ9 124 aa-0.29□□□□□ -2.46
RNU6-540P-201ENST00000384622 LOC105378220A0A1B0GUY1 285 aaPredicted RBP-0.29□□□□□ -2.46
RNU6-540P-201ENST00000384622 LOC101059915A0A1B0GWI6 518 aaPredicted RBP-0.29□□□□□ -2.46
RNU6-540P-201ENST00000384622 ERVV-1B6SEH8 477 aa-0.29□□□□□ -2.46
RNU6-540P-201ENST00000384622 HHLA1C9JL84 531 aa-0.29□□□□□ -2.46
RNU6-540P-201ENST00000384622 PHOX2AO14813 284 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms