RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 C15orf52Q6ZUT6 534 aaKnown RBP15.45■□□□□ 0.06
CTNS-202ENST00000381870 KRT27Q7Z3Y8 459 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 TMEM161BQ8NDZ6 487 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 BHLHE22Q8NFJ8 381 aaPredicted RBP15.45■□□□□ 0.06
CTNS-202ENST00000381870 GSDMBQ8TAX9 411 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 FAF2Q96CS3 445 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 FBXL18Q96ME1 805 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 HNRNPABQ99729 332 aaKnown RBP15.45■□□□□ 0.06
CTNS-202ENST00000381870 DNAJC28Q9NX36 388 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 NYAP2Q9P242 653 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 CNTNAP2Q9UHC6 1331 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 C7orf72A4D263 438 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 KRT38O76015 456 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 PRKCHP24723 683 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 PKNOX1P55347 436 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 NUP107P57740 925 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 MS4A2Q01362 244 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 CTBSQ01459 385 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 KLF10Q13118 480 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 CYP4A22Q5TCH4 519 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 C15orf39Q6ZRI6 1047 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 RFX6Q8HWS3 928 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 RNF169Q8NCN4 708 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 CCDC97Q96F63 343 aaPredicted RBP15.44■□□□□ 0.06
CTNS-202ENST00000381870 LENG8Q96PV6 779 aaPredicted RBP15.44■□□□□ 0.06
CTNS-202ENST00000381870 WRNIP1Q96S55 665 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 CDRT15Q96T59 188 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 RTKNQ9BST9 563 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 INO80BQ9C086 356 aaPredicted RBP15.44■□□□□ 0.06
CTNS-202ENST00000381870 PAIP1Q9H074 479 aaKnown RBP15.44■□□□□ 0.06
CTNS-202ENST00000381870 EPS15L1Q9UBC2 864 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 AFG3L2Q9Y4W6 797 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 H6PDO95479 791 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 FUCA1P04066 466 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 KDELR1P24390 212 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 RPL10P27635 214 aaKnown RBP15.44■□□□□ 0.06
CTNS-202ENST00000381870 HSPA13P48723 471 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 SCNN1DP51172 638 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 CUL2Q13617 745 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 PPP2R5DQ14738 602 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 TDRD10Q5VZ19 366 aaKnown RBP15.44■□□□□ 0.06
CTNS-202ENST00000381870 DNAJC14Q6Y2X3 702 aaPredicted RBP15.44■□□□□ 0.06
CTNS-202ENST00000381870 MAP4K3Q8IVH8 894 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 ARFGAP1Q8N6T3 406 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 UBR7Q8N806 425 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 CCDC17Q96LX7 622 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 NUF2Q9BZD4 464 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 ANLNQ9NQW6 1124 aa15.44■□□□□ 0.06
CTNS-202ENST00000381870 MATN2O00339 956 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 NOP56O00567 594 aaKnown RBP15.43■□□□□ 0.06
CTNS-202ENST00000381870 SERPINB5P36952 375 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 NPTX2P47972 431 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 SOX10P56693 466 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 SLC25A11Q02978 314 aaKnown RBP15.43■□□□□ 0.06
CTNS-202ENST00000381870 PIGHQ14442 188 aaPredicted RBP15.43■□□□□ 0.06
CTNS-202ENST00000381870 PPM1LQ5SGD2 360 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 N4BP2L1Q5TBK1 243 aaPredicted RBP15.43■□□□□ 0.06
CTNS-202ENST00000381870 CLVS1Q8IUQ0 354 aaPredicted RBP15.43■□□□□ 0.06
CTNS-202ENST00000381870 TMEM126BQ8IUX1 230 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 USP13Q92995 863 aaPredicted RBP15.43■□□□□ 0.06
CTNS-202ENST00000381870 KLHL32Q96NJ5 620 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 RAB6BQ9NRW1 208 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 SLC9A2Q9UBY0 812 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 PRR12Q9ULL5 1215 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 PTPRJQ12913 1337 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 GDF11O95390 407 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 VNN1O95497 513 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 OCM2P0CE71 109 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 OCMP0CE72 109 aaPredicted RBP15.43■□□□□ 0.06
CTNS-202ENST00000381870 ZNF26P17031 533 aaPredicted RBP15.43■□□□□ 0.06
CTNS-202ENST00000381870 PRDX6P30041 224 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 GABRB2P47870 512 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 ACADVLP49748 655 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 SPP2Q13103 211 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 TAF5Q15542 800 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 ZNF423Q2M1K9 1284 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 SCARA3Q6AZY7 606 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 OGFOD2Q6N063 350 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 DCDC5Q6ZRR9 648 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 USP37Q86T82 979 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 C10orf107Q8IVU9 208 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 GPD1LQ8N335 351 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 ARL10Q8N8L6 244 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 TMEM102Q8N9M5 508 aaPredicted RBP15.43■□□□□ 0.06
CTNS-202ENST00000381870 SPATA18Q8TC71 538 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 ZNF606Q8WXB4 792 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 GCOM2Q9BZD3 368 aaPredicted RBP15.43■□□□□ 0.06
CTNS-202ENST00000381870 DHX33Q9H6R0 707 aaKnown RBP15.43■□□□□ 0.06
CTNS-202ENST00000381870 TBC1D23Q9NUY8 699 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 IGSF9Q9P2J2 1179 aa15.43■□□□□ 0.06
CTNS-202ENST00000381870 PRSS51A0A1B0GVH4 220 aa15.42■□□□□ 0.06
CTNS-202ENST00000381870 SPDYE2BA6NHP3 402 aa15.42■□□□□ 0.06
CTNS-202ENST00000381870 MCF2LO15068 1137 aa15.42■□□□□ 0.06
CTNS-202ENST00000381870 CFLARO15519 480 aa15.42■□□□□ 0.06
CTNS-202ENST00000381870 RNASEH2AO75792 299 aaKnown RBP15.42■□□□□ 0.06
CTNS-202ENST00000381870 APOEP02649 317 aa15.42■□□□□ 0.06
CTNS-202ENST00000381870 SPDYE6P0CI01 402 aa15.42■□□□□ 0.06
CTNS-202ENST00000381870 TNNI1P19237 187 aa15.42■□□□□ 0.06
CTNS-202ENST00000381870 YWHABP31946 246 aaKnown RBP15.42■□□□□ 0.06
CTNS-202ENST00000381870 BCAP31P51572 246 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms