RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 BLOC1S6Q9UL45 172 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 MTA2O94776 668 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 PDGFRBP09619 1106 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 CCDC166P0CW27 439 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 C21orf59P57076 290 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 NLRP11P59045 1033 aaKnown RBP12.53□□□□□ -0.4
SHOX-203ENST00000381578 TRIM16LQ309B1 348 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 DACT2Q5SW24 774 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 AAGABQ6PD74 315 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 UNC5BQ8IZJ1 945 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 PHTF2Q8N3S3 785 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 KYQ8NBH2 561 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 CCDC90BQ9GZT6 254 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 KLHL25Q9H0H3 589 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 GPAMQ9HCL2 828 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 RGS17Q9UGC6 210 aaPredicted RBP12.53□□□□□ -0.4
SHOX-203ENST00000381578 UBR3Q6ZT12 1888 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 STX16-NPEPL1H3BU86 382 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 RBL1P28749 1068 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 MAP3K10Q02779 954 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 ZNF699Q32M78 642 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 PPM1JQ5JR12 505 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 ZBTB49Q6ZSB9 765 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 C10orf107Q8IVU9 208 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 CATSPER1Q8NEC5 780 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 ZDHHC15Q96MV8 337 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 ZNF232Q9UNY5 417 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 NR2E3Q9Y5X4 410 aa12.53□□□□□ -0.4
SHOX-203ENST00000381578 CACNA1SQ13698 1873 aa12.52□□□□□ -0.4
SHOX-203ENST00000381578 GOLGA8TH3BQL2 631 aa12.52□□□□□ -0.4
SHOX-203ENST00000381578 GMNNO75496 209 aa12.52□□□□□ -0.4
SHOX-203ENST00000381578 STIP1P31948 543 aaKnown RBP12.52□□□□□ -0.4
SHOX-203ENST00000381578 RAP1GAPP47736 663 aa12.52□□□□□ -0.4
SHOX-203ENST00000381578 GPC3P51654 580 aa12.52□□□□□ -0.4
SHOX-203ENST00000381578 GTF2A2P52657 109 aa12.52□□□□□ -0.4
SHOX-203ENST00000381578 PERM1Q5SV97 790 aa12.52□□□□□ -0.4
SHOX-203ENST00000381578 LDLRAP1Q5SW96 308 aa12.52□□□□□ -0.4
SHOX-203ENST00000381578 GPR107Q5VW38 600 aa12.52□□□□□ -0.4
SHOX-203ENST00000381578 KLHL35Q6PF15 583 aa12.52□□□□□ -0.4
SHOX-203ENST00000381578 FRMD7Q6ZUT3 714 aa12.52□□□□□ -0.4
SHOX-203ENST00000381578 LZICQ8WZA0 190 aa12.52□□□□□ -0.4
SHOX-203ENST00000381578 GFM2Q969S9 779 aaKnown RBP12.52□□□□□ -0.4
SHOX-203ENST00000381578 RCN3Q96D15 328 aa12.52□□□□□ -0.4
SHOX-203ENST00000381578 MOCOSQ96EN8 888 aa12.52□□□□□ -0.4
SHOX-203ENST00000381578 CCDC138Q96M89 665 aa12.52□□□□□ -0.4
SHOX-203ENST00000381578 LENG8Q96PV6 779 aaPredicted RBP12.52□□□□□ -0.4
SHOX-203ENST00000381578 TCF7L2Q9NQB0 619 aa12.52□□□□□ -0.4
SHOX-203ENST00000381578 A0A088AWK7 358 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 LSM1O15116 133 aaKnown RBP12.52□□□□□ -0.41
SHOX-203ENST00000381578 TGDSO95455 350 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 AMHP03971 560 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 POU5F1BQ06416 359 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 TRAF2Q12933 501 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 RPS6KA2Q15349 733 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 CARTPTQ16568 116 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 CMPK2Q5EBM0 449 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 FBXW8Q8N3Y1 598 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 SNX31Q8N9S9 440 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 GABPB2Q8TAK5 448 aaPredicted RBP12.52□□□□□ -0.41
SHOX-203ENST00000381578 EXT2Q93063 718 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 MKL1Q969V6 931 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 RMDN3Q96TC7 470 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 KCND2Q9NZV8 630 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 TPP1O14773 563 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 BPGMP07738 259 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 IL1RL1Q01638 556 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 PTK2BQ14289 1009 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 COL24A1Q17RW2 1714 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 DALRD3Q5D0E6 543 aaKnown RBP12.52□□□□□ -0.41
SHOX-203ENST00000381578 C16orf89Q6UX73 402 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 CMC1Q7Z7K0 106 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 SLC9A9Q8IVB4 645 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 JOSD2Q8TAC2 188 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 CASP10Q92851 521 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 FAM149B1Q96BN6 582 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 ZMAT2Q96NC0 199 aaKnown RBP12.52□□□□□ -0.41
SHOX-203ENST00000381578 CIB1Q99828 191 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 MXRA8Q9BRK3 442 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 MRPS26Q9BYN8 205 aaKnown RBP12.52□□□□□ -0.41
SHOX-203ENST00000381578 UPF3AQ9H1J1 476 aaKnown RBP12.52□□□□□ -0.41
SHOX-203ENST00000381578 ZNF358Q9NW07 568 aa12.52□□□□□ -0.41
SHOX-203ENST00000381578 WDR27A2RRH5 827 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 CPA3P15088 417 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 MAGEA8P43361 318 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 MAPK11Q15759 364 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 SLC16A10Q8TF71 515 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 TMIGD2Q96BF3 282 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 MBOAT7Q96N66 472 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 MTMR12Q9C0I1 747 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 ADNPQ9H2P0 1102 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 PAK5Q9P286 719 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.51□□□□□ -0.41
SHOX-203ENST00000381578 CCDC88AQ3V6T2 1871 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 J3QRK9 145 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 ITGAVP06756 1048 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 SNHG28P0DPA3 235 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 UNGP13051 313 aaPredicted RBP12.51□□□□□ -0.41
SHOX-203ENST00000381578 NR4A1P22736 598 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 AVPR1AP37288 418 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 GCNT1Q02742 428 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms