RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 SERPINB11Q96P15 392 aa20.21■□□□□ 0.83
GTF3A-201ENST00000381140 AGO1Q9UL18 857 aaKnown RBP20.21■□□□□ 0.83
GTF3A-201ENST00000381140 KIAA1549LQ6ZVL6 1849 aa20.2■□□□□ 0.82
GTF3A-201ENST00000381140 TRUB2O95900 331 aaKnown RBP20.2■□□□□ 0.82
GTF3A-201ENST00000381140 MMP8P22894 467 aa20.2■□□□□ 0.82
GTF3A-201ENST00000381140 CDK17Q00537 523 aa20.2■□□□□ 0.82
GTF3A-201ENST00000381140 CENPCQ03188 943 aa20.2■□□□□ 0.82
GTF3A-201ENST00000381140 C1orf228Q6PIY5 440 aa20.2■□□□□ 0.82
GTF3A-201ENST00000381140 BEND5Q7L4P6 421 aa20.2■□□□□ 0.82
GTF3A-201ENST00000381140 ZNF571Q7Z3V5 609 aaPredicted RBP20.2■□□□□ 0.82
GTF3A-201ENST00000381140 SLC2A13Q96QE2 648 aa20.2■□□□□ 0.82
GTF3A-201ENST00000381140 NELL2Q99435 816 aa20.2■□□□□ 0.82
GTF3A-201ENST00000381140 NUCKS1Q9H1E3 243 aaKnown RBP20.2■□□□□ 0.82
GTF3A-201ENST00000381140 SPHK2Q9NRA0 654 aa20.2■□□□□ 0.82
GTF3A-201ENST00000381140 METTL5Q9NRN9 209 aaKnown RBP20.2■□□□□ 0.82
GTF3A-201ENST00000381140 ADAM22Q9P0K1 906 aa20.2■□□□□ 0.82
GTF3A-201ENST00000381140 ZNF510Q9Y2H8 683 aa20.2■□□□□ 0.82
GTF3A-201ENST00000381140 PRKCIP41743 596 aa20.19■□□□□ 0.82
GTF3A-201ENST00000381140 GAD2Q05329 585 aa20.19■□□□□ 0.82
GTF3A-201ENST00000381140 TRIM14Q14142 442 aa20.19■□□□□ 0.82
GTF3A-201ENST00000381140 NAT16Q8N8M0 369 aa20.19■□□□□ 0.82
GTF3A-201ENST00000381140 P2RY13Q9BPV8 354 aa20.19■□□□□ 0.82
GTF3A-201ENST00000381140 BBS2Q9BXC9 721 aa20.19■□□□□ 0.82
GTF3A-201ENST00000381140 RBM12Q9NTZ6 932 aaKnown RBP20.19■□□□□ 0.82
GTF3A-201ENST00000381140 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.19■□□□□ 0.82
GTF3A-201ENST00000381140 NEDD8-MDP1E9PL57 170 aa20.18■□□□□ 0.82
GTF3A-201ENST00000381140 TRDMT1O14717 391 aaKnown RBP20.18■□□□□ 0.82
GTF3A-201ENST00000381140 NCAM2O15394 837 aa20.18■□□□□ 0.82
GTF3A-201ENST00000381140 MOCS2O96007 188 aaPredicted RBP20.18■□□□□ 0.82
GTF3A-201ENST00000381140 TPM1P09493 284 aa20.18■□□□□ 0.82
GTF3A-201ENST00000381140 SLC6A11P48066 632 aa20.18■□□□□ 0.82
GTF3A-201ENST00000381140 GALK1P51570 392 aa20.18■□□□□ 0.82
GTF3A-201ENST00000381140 NME3Q13232 169 aa20.18■□□□□ 0.82
GTF3A-201ENST00000381140 PHF13Q86YI8 300 aaPredicted RBP20.18■□□□□ 0.82
GTF3A-201ENST00000381140 CD101Q93033 1021 aa20.18■□□□□ 0.82
GTF3A-201ENST00000381140 RNF34Q969K3 372 aa20.18■□□□□ 0.82
GTF3A-201ENST00000381140 SYT11Q9BT88 431 aa20.18■□□□□ 0.82
GTF3A-201ENST00000381140 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.18■□□□□ 0.82
GTF3A-201ENST00000381140 LMAN1LQ9HAT1 526 aa20.18■□□□□ 0.82
GTF3A-201ENST00000381140 DDIT4Q9NX09 232 aa20.18■□□□□ 0.82
GTF3A-201ENST00000381140 TAS2R14Q9NYV8 317 aa20.18■□□□□ 0.82
GTF3A-201ENST00000381140 TLR6Q9Y2C9 796 aa20.18■□□□□ 0.82
GTF3A-201ENST00000381140 IRAK2O43187 625 aa20.17■□□□□ 0.82
GTF3A-201ENST00000381140 TSPAN3O60637 253 aa20.17■□□□□ 0.82
GTF3A-201ENST00000381140 GJB6O95452 261 aa20.17■□□□□ 0.82
GTF3A-201ENST00000381140 IGLV3-27P01718 113 aa20.17■□□□□ 0.82
GTF3A-201ENST00000381140 CALB1P05937 261 aa20.17■□□□□ 0.82
GTF3A-201ENST00000381140 NOS2P35228 1153 aa20.17■□□□□ 0.82
GTF3A-201ENST00000381140 MATKP42679 507 aa20.17■□□□□ 0.82
GTF3A-201ENST00000381140 SULT1E1P49888 294 aa20.17■□□□□ 0.82
GTF3A-201ENST00000381140 KDSRQ06136 332 aa20.17■□□□□ 0.82
GTF3A-201ENST00000381140 GRSF1Q12849 480 aaKnown RBP eCLIP20.17■□□□□ 0.82
GTF3A-201ENST00000381140 GAB4Q2WGN9 574 aa20.17■□□□□ 0.82
GTF3A-201ENST00000381140 ZC3H12AQ5D1E8 599 aaKnown RBP20.17■□□□□ 0.82
GTF3A-201ENST00000381140 NUGGCQ68CJ6 796 aa20.17■□□□□ 0.82
GTF3A-201ENST00000381140 ACAD10Q6JQN1 1059 aa20.17■□□□□ 0.82
GTF3A-201ENST00000381140 C12orf40Q86WS4 652 aa20.17■□□□□ 0.82
GTF3A-201ENST00000381140 UNC45BQ8IWX7 931 aa20.17■□□□□ 0.82
GTF3A-201ENST00000381140 SYN2Q92777 582 aaPredicted RBP20.17■□□□□ 0.82
GTF3A-201ENST00000381140 TRIM44Q96DX7 344 aaPredicted RBP20.17■□□□□ 0.82
GTF3A-201ENST00000381140 FCRL2Q96LA5 508 aaPredicted RBP20.17■□□□□ 0.82
GTF3A-201ENST00000381140 FBRSL1Q9HCM7 1045 aaKnown RBP20.17■□□□□ 0.82
GTF3A-201ENST00000381140 PLK2Q9NYY3 685 aa20.17■□□□□ 0.82
GTF3A-201ENST00000381140 M0QYT0 321 aa20.16■□□□□ 0.82
GTF3A-201ENST00000381140 APOEP02649 317 aa20.16■□□□□ 0.82
GTF3A-201ENST00000381140 PLEKP08567 350 aaPredicted RBP20.16■□□□□ 0.82
GTF3A-201ENST00000381140 GBP1P32455 592 aa20.16■□□□□ 0.82
GTF3A-201ENST00000381140 CHKAP35790 457 aa20.16■□□□□ 0.82
GTF3A-201ENST00000381140 SCNN1AP37088 669 aa20.16■□□□□ 0.82
GTF3A-201ENST00000381140 OPRD1P41143 372 aa20.16■□□□□ 0.82
GTF3A-201ENST00000381140 SLC11A2P49281 568 aa20.16■□□□□ 0.82
GTF3A-201ENST00000381140 RING1Q06587 406 aa20.16■□□□□ 0.82
GTF3A-201ENST00000381140 PTP4A2Q12974 167 aa20.16■□□□□ 0.82
GTF3A-201ENST00000381140 FSTL4Q6MZW2 842 aa20.16■□□□□ 0.82
GTF3A-201ENST00000381140 MON1BQ7L1V2 547 aa20.16■□□□□ 0.82
GTF3A-201ENST00000381140 DNAAF5Q86Y56 855 aa20.16■□□□□ 0.82
GTF3A-201ENST00000381140 EMC1Q8N766 993 aa20.16■□□□□ 0.82
GTF3A-201ENST00000381140 OLIG1Q8TAK6 271 aa20.16■□□□□ 0.82
GTF3A-201ENST00000381140 EXOC4Q96A65 974 aa20.16■□□□□ 0.82
GTF3A-201ENST00000381140 SELENOOQ9BVL4 669 aa20.16■□□□□ 0.82
GTF3A-201ENST00000381140 OSBPL6Q9BZF3 934 aa20.16■□□□□ 0.82
GTF3A-201ENST00000381140 STAP1Q9ULZ2 295 aa20.16■□□□□ 0.82
GTF3A-201ENST00000381140 MYO18AQ92614 2054 aaKnown RBP20.15■□□□□ 0.82
GTF3A-201ENST00000381140 GOLGA6L7A0A1B0GV03 622 aa20.15■□□□□ 0.82
GTF3A-201ENST00000381140 DDX3XO00571 662 aaKnown RBP eCLIP20.15■□□□□ 0.825e-21■■■■■ 78.7
GTF3A-201ENST00000381140 HOXC11O43248 304 aaPredicted RBP20.15■□□□□ 0.82
GTF3A-201ENST00000381140 EGFP01133 1207 aa20.15■□□□□ 0.82
GTF3A-201ENST00000381140 SERPING1P05155 500 aa20.15■□□□□ 0.82
GTF3A-201ENST00000381140 TYRP14679 529 aa20.15■□□□□ 0.82
GTF3A-201ENST00000381140 TFE3P19532 575 aaPredicted RBP20.15■□□□□ 0.82
GTF3A-201ENST00000381140 FLT3P36888 993 aa20.15■□□□□ 0.82
GTF3A-201ENST00000381140 NNTQ13423 1086 aa20.15■□□□□ 0.82
GTF3A-201ENST00000381140 LRRC32Q14392 662 aa20.15■□□□□ 0.82
GTF3A-201ENST00000381140 TMEM196Q5HYL7 178 aa20.15■□□□□ 0.82
GTF3A-201ENST00000381140 HGSNATQ68CP4 663 aa20.15■□□□□ 0.82
GTF3A-201ENST00000381140 ZNF687Q8N1G0 1237 aa20.15■□□□□ 0.82
GTF3A-201ENST00000381140 WDR35Q9P2L0 1181 aa20.15■□□□□ 0.82
GTF3A-201ENST00000381140 BZW2Q9Y6E2 419 aaKnown RBP20.15■□□□□ 0.82
GTF3A-201ENST00000381140 CACNA1IQ9P0X4 2223 aa20.15■□□□□ 0.82
GTF3A-201ENST00000381140 ACSL4O60488 711 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms