RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 PAQR9Q6ZVX9 377 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 SERINC5Q86VE9 423 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 LRRC6Q86X45 466 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 IGDCC3Q8IVU1 814 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 CCDC185Q8N715 623 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 HTR3CQ8WXA8 447 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 FAM149B1Q96BN6 582 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 APOPT1Q96IL0 206 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 SPATA13Q96N96 652 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 LPIN3Q9BQK8 851 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 ADAM33Q9BZ11 813 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 BRD8Q9H0E9 1235 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 MLXIPLQ9NP71 852 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 ARHGEF4Q9NR80 690 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 TMEM51Q9NW97 253 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.8□□□□□ -0.2
LCMT1-201ENST00000380962 ZC3H7BQ9UGR2 993 aaKnown RBP13.8□□□□□ -0.2
LCMT1-201ENST00000380962 ST3GAL5Q9UNP4 418 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 USH1CQ9Y6N9 552 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 TRIP12Q14669 1992 aaPredicted RBP13.8□□□□□ -0.2
LCMT1-201ENST00000380962 ARHGEF37A1IGU5 675 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 PPP1R12AO14974 1030 aaPredicted RBP13.8□□□□□ -0.2
LCMT1-201ENST00000380962 ATP5HO75947 161 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 F9P00740 461 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 APRTP07741 180 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 DHRS4L1P0CG22 281 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 CYBAP13498 195 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 CNTFP26441 200 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 NEK3P51956 506 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 MGAT3Q09327 533 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 SREBF2Q12772 1141 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 SLC10A2Q12908 348 aaPredicted RBP13.8□□□□□ -0.2
LCMT1-201ENST00000380962 BNIP1Q12981 228 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 EFTUD2Q15029 972 aaKnown RBP eCLIP13.8□□□□□ -0.2
LCMT1-201ENST00000380962 SLC1A5Q15758 541 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 SPRED3Q2MJR0 410 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 KBTBD12Q3ZCT8 623 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 OTUD1Q5VV17 481 aaPredicted RBP13.8□□□□□ -0.2
LCMT1-201ENST00000380962 STEAP4Q687X5 459 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 CGB2Q6NT52 195 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 CHADLQ6NUI6 762 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 ZNF449Q6P9G9 518 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 LVRNQ6Q4G3 990 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 CCDC110Q8TBZ0 833 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 RNF139Q8WU17 664 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 IRGQQ8WZA9 623 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 EBNA1BP2Q99848 306 aaKnown RBP13.8□□□□□ -0.2
LCMT1-201ENST00000380962 SYT15Q9BQS2 421 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 NAT9Q9BTE0 207 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 MED10Q9BTT4 135 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 TRIM62Q9BVG3 475 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 KIF9Q9HAQ2 790 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 ABCF3Q9NUQ8 709 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 DDX43Q9NXZ2 648 aaKnown RBP13.8□□□□□ -0.2
LCMT1-201ENST00000380962 PHTF1Q9UMS5 762 aa13.8□□□□□ -0.2
LCMT1-201ENST00000380962 NCAM2O15394 837 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 DCTN3O75935 186 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 APOEP02649 317 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 SNRPAP09012 282 aaKnown RBP13.79□□□□□ -0.2
LCMT1-201ENST00000380962 C6orf222P0C671 652 aaPredicted RBP13.79□□□□□ -0.2
LCMT1-201ENST00000380962 ALDH3A1P30838 453 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 HNRNPH1P31943 449 aaKnown RBP13.79□□□□□ -0.2
LCMT1-201ENST00000380962 CCNFP41002 786 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 NRLP54845 237 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 DAOAP59103 153 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 DNAJC3Q13217 504 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 DPYSQ14117 519 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 ZKSCAN8Q15776 578 aaPredicted RBP13.79□□□□□ -0.2
LCMT1-201ENST00000380962 DBN1Q16643 649 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 DCAF6Q58WW2 860 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 MDH1BQ5I0G3 518 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 FBXW10Q5XX13 1052 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 SH2D5Q6ZV89 423 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 BEND5Q7L4P6 421 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 FAM35AQ86V20 835 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 TRIM42Q8IWZ5 723 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 GSTCDQ8NEC7 633 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 GSDMBQ8TAX9 411 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 ZNF75CPQ92670 426 aaPredicted RBP13.79□□□□□ -0.2
LCMT1-201ENST00000380962 SIGLEC10Q96LC7 697 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 PAIP2Q9BPZ3 127 aaKnown RBP13.79□□□□□ -0.2
LCMT1-201ENST00000380962 KLC4Q9NSK0 619 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 DSEQ9UL01 958 aa13.79□□□□□ -0.2
LCMT1-201ENST00000380962 FAM159BA6NKW6 160 aa13.78□□□□□ -0.2
LCMT1-201ENST00000380962 KLF11O14901 512 aa13.78□□□□□ -0.2
LCMT1-201ENST00000380962 MTSS1O43312 755 aa13.78□□□□□ -0.2
LCMT1-201ENST00000380962 KRT38O76015 456 aa13.78□□□□□ -0.2
LCMT1-201ENST00000380962 UBOX5O94941 541 aa13.78□□□□□ -0.2
LCMT1-201ENST00000380962 METTL18O95568 372 aa13.78□□□□□ -0.2
LCMT1-201ENST00000380962 CYP11A1P05108 521 aa13.78□□□□□ -0.2
LCMT1-201ENST00000380962 SKIP12755 728 aa13.78□□□□□ -0.2
LCMT1-201ENST00000380962 GOT1P17174 413 aa13.78□□□□□ -0.2
LCMT1-201ENST00000380962 AMPD1P23109 780 aa13.78□□□□□ -0.2
LCMT1-201ENST00000380962 ATXN1P54253 815 aaKnown RBP13.78□□□□□ -0.2
LCMT1-201ENST00000380962 DEUP1Q05D60 604 aa13.78□□□□□ -0.2
LCMT1-201ENST00000380962 SETDB1Q15047 1291 aa13.78□□□□□ -0.2
LCMT1-201ENST00000380962 NBPF20Q3BBV1 942 aa13.78□□□□□ -0.2
LCMT1-201ENST00000380962 GNASQ5JWF2 1037 aa13.78□□□□□ -0.2
LCMT1-201ENST00000380962 FYB2Q5VWT5 728 aa13.78□□□□□ -0.2
LCMT1-201ENST00000380962 LRRC8BQ6P9F7 803 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms