RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 UBE2OQ9C0C9 1292 aaKnown RBP13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 CACYBPQ9HB71 228 aaKnown RBP13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 MGRN1O60291 552 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 PGAM1P18669 254 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 ATP6V1C1P21283 382 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 UBA1P22314 1058 aaKnown RBP13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 TNFSF9P41273 254 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 FOXD4Q12950 439 aaPredicted RBP13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 CLNKQ7Z7G1 428 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 ZDHHC17Q8IUH5 632 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 ADGRF2Q8IZF7 708 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 RNF148Q8N7C7 305 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 REPS2Q8NFH8 660 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 PYDC1Q8WXC3 89 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 SLC17A7Q9P2U7 560 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 RGPD1P0DJD0 1748 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 A8MUI8 341 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 CCNE2O96020 404 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 CPB1P15086 417 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 CHRNB2P17787 502 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 CAPSQ13938 189 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 AASDHQ4L235 1098 aaPredicted RBP13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 ASPSCR1Q9BZE9 553 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 SORCS3Q9UPU3 1222 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 H3BRB1 525 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 NCAM2O15394 837 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 SNUPNO95149 360 aaKnown RBP13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 PTPN7P35236 360 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 YWHAZP63104 245 aaKnown RBP13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 SNAPC2Q13487 334 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 LAMB3Q13751 1172 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 USP13Q92995 863 aaPredicted RBP13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 TUBGCP3Q96CW5 907 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 TUT1Q9H6E5 874 aaKnown RBP13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 MED1Q15648 1581 aaPredicted RBP13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 SUPT3HB4E1H0 165 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 PLA2G6O60733 806 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 DDHD2O94830 711 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 HMBSP08397 361 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 RAG1P15918 1043 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 CDK7P50613 346 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 KCNK10P57789 538 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 GRTP1Q5TC63 336 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 ZNF786Q8N393 782 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 TBC1D23Q9NUY8 699 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 CYB561D2O14569 222 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 PRPF4O43172 522 aaKnown RBP eCLIP13.06□□□□□ -0.321e-6■■■■□ 22
DNMT3A-204ENST00000380756 USP12O75317 370 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 TPH1P17752 444 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 ZNF157P51786 506 aaPredicted RBP13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 HUNKP57058 714 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 FASTKD3Q14CZ7 662 aaKnown RBP13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 CYP1B1Q16678 543 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 WLSQ5T9L3 541 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 NKD2Q969F2 451 aaPredicted RBP13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 LENG9Q96B70 501 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 CHD2O14647 1828 aaKnown RBP13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 MAGEB16A2A368 324 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 C16orf96A6NNT2 1141 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 TRUB2O95900 331 aaKnown RBP13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 PYGLP06737 847 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 SLC25A3Q00325 362 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 SPIRE1Q08AE8 756 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 ADRM1Q16186 407 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 AGKQ53H12 422 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 SNX32Q86XE0 403 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 DEFB106AQ8N104 65 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 PIK3R5Q8WYR1 880 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 CATSPER2Q96P56 530 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 V9GYQ6 96 aa13.06□□□□□ -0.32
DNMT3A-204ENST00000380756 STRNO43815 780 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 CSPG5O95196 566 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 MT-CO1P00395 513 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 C6orf222P0C671 652 aaPredicted RBP13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 ATP4AP20648 1035 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 TKTL1P51854 596 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 CCDC15Q0P6D6 951 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 ADIGQ0VDE8 80 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 PTP4A2Q12974 167 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 OASLQ15646 514 aaKnown RBP13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 IL31Q6EBC2 164 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 MON1BQ7L1V2 547 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 JOSD2Q8TAC2 188 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 SNRNP25Q9BV90 132 aaKnown RBP13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 SNTG2Q9NY99 539 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 LGALS13Q9UHV8 139 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 BLOC1S6Q9UL45 172 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 KCPQ6ZWJ8 1503 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 B3GAT3O94766 335 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 MPOP05164 745 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 CRADDP78560 199 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 CSHL1Q14406 222 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 DCAF12L1Q5VU92 463 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 CPNE8Q86YQ8 564 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 URGCPQ8TCY9 931 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 BSNDQ8WZ55 320 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 CDRT15Q96T59 188 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms