RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 TPI1P60174 286 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 EFHC2Q5JST6 749 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 SYPL2Q5VXT5 272 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 CRLF3Q8IUI8 442 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 RYBPQ8N488 228 aaPredicted RBP11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 CCNYL1Q8N7R7 359 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 SMC1BQ8NDV3 1235 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 OR52K1Q8NGK4 314 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 TFB1MQ8WVM0 346 aaKnown RBP11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 TMEM40Q8WWA1 233 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 CDKL2Q92772 493 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 ATP2A3Q93084 1043 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 ULBP1Q9BZM6 244 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 PRDM12Q9H4Q4 367 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 DDX43Q9NXZ2 648 aaKnown RBP11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 PPP2R3BQ9Y5P8 575 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 SPTLC1O15269 473 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 EDF1O60869 148 aaKnown RBP11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 JCHAINP01591 159 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 CSH1P0DML2 217 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 CSH2P0DML3 217 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 EDNRBP24530 442 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 GCAP28676 217 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 CA8P35219 290 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 SLC26A2P50443 739 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 YWHAZP63104 245 aaKnown RBP11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 PPIL2Q13356 520 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 NOMO1Q15155 1222 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 PDK4Q16654 411 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 RINLQ6ZS11 566 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 SLC26A11Q86WA9 606 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 CDKL3Q8IVW4 592 aaPredicted RBP11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 GPR152Q8TDT2 470 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 FGD4Q96M96 766 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 TMEM109Q9BVC6 243 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 PRG3Q9Y2Y8 225 aaPredicted RBP11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 KIAA1217Q5T5P2 1943 aa11.31□□□□□ -0.6
DNMT3A-203ENST00000380746 LRRC37AA6NMS7 1700 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 FAM189A1O60320 539 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 PMPCBO75439 489 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 BEST1O76090 585 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 POU5F1BQ06416 359 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 BST1Q10588 318 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 HSP90AA5PQ58FG0 334 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 CDCA2Q69YH5 1023 aaPredicted RBP11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 UNC5AQ6ZN44 842 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 PLEKHH3Q7Z736 793 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 FAM228AQ86W67 206 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 NPLOC4Q8TAT6 608 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 SLCO2A1Q92959 643 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 CYP3A43Q9HB55 503 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 ARL8BQ9NVJ2 186 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 CFAP73A6NFT4 308 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 TNPO2O14787 897 aaKnown RBP11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 ZWINTO95229 277 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 SNAI1O95863 264 aaPredicted RBP11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 MMP3P08254 477 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 YBX3P16989 372 aaKnown RBP eCLIP11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 LCLAT1Q6UWP7 414 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 C2orf69Q8N8R5 385 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 IPMKQ8NFU5 416 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 TSNARE1Q96NA8 513 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 SYT17Q9BSW7 474 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 LHX5Q9H2C1 402 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 SENP1Q9P0U3 644 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 SLC24A2Q9UI40 661 aa11.3□□□□□ -0.6
DNMT3A-203ENST00000380746 MFSD11O43934 449 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 GHRP10912 638 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 PGM1P36871 562 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 SCNN1GP51170 649 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 ZNF157P51786 506 aaPredicted RBP11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 SLC10A2Q12908 348 aaPredicted RBP11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 STX3Q13277 289 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 XRCC4Q13426 336 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 GEN1Q17RS7 908 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 VWA5B1Q5TIE3 1220 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 TTC39BQ5VTQ0 682 aaPredicted RBP11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 C9orf57Q5W0N0 161 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 RFWD3Q6PCD5 774 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 HTR3CQ8WXA8 447 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 BRI3BPQ8WY22 251 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 KCTD15Q96SI1 283 aaPredicted RBP11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 PTPRHQ9HD43 1115 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 SLC39A10Q9ULF5 831 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 UBQLN1Q9UMX0 589 aaKnown RBP11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 ATP8B3O60423 1300 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 ABLIM1O14639 778 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 KIF1CO43896 1103 aaKnown RBP11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 DNAJC8O75937 253 aaPredicted RBP11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 UNC5CO95185 931 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 BDNFP23560 247 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 SOX4Q06945 474 aaPredicted RBP11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 BST2Q10589 180 aaKnown RBP11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 THOC5Q13769 683 aaKnown RBP11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 UBAP2LQ14157 1087 aaKnown RBP11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 TCEAL1Q15170 157 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 DLG2Q15700 870 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 TAPT1Q6NXT6 567 aa11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 RIBC1Q8N443 379 aaPredicted RBP11.29□□□□□ -0.6
DNMT3A-203ENST00000380746 RNF148Q8N7C7 305 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms