RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 STRADAQ7RTN6 431 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 CELF5Q8N6W0 485 aaKnown RBP19.57■□□□□ 0.72
SMN2-202ENST00000380742 ATXN2LQ8WWM7 1075 aaKnown RBP19.57■□□□□ 0.72
SMN2-202ENST00000380742 FCRL2Q96LA5 508 aaPredicted RBP19.57■□□□□ 0.72
SMN2-202ENST00000380742 MYO1FO00160 1098 aa19.56■□□□□ 0.72
SMN2-202ENST00000380742 GREM1O60565 184 aa19.56■□□□□ 0.72
SMN2-202ENST00000380742 TCF3P15923 654 aa19.56■□□□□ 0.72
SMN2-202ENST00000380742 ARHGAP25P42331 645 aa19.56■□□□□ 0.72
SMN2-202ENST00000380742 NOP2P46087 812 aaKnown RBP19.56■□□□□ 0.72
SMN2-202ENST00000380742 CXCR3P49682 368 aa19.56■□□□□ 0.72
SMN2-202ENST00000380742 HDAC4P56524 1084 aa19.56■□□□□ 0.72
SMN2-202ENST00000380742 USP4Q13107 963 aa19.56■□□□□ 0.72
SMN2-202ENST00000380742 ZNF77Q15935 545 aa19.56■□□□□ 0.72
SMN2-202ENST00000380742 ZC3H12AQ5D1E8 599 aaKnown RBP19.56■□□□□ 0.72
SMN2-202ENST00000380742 ZDHHC14Q8IZN3 488 aa19.56■□□□□ 0.72
SMN2-202ENST00000380742 TXLNBQ8N3L3 684 aa19.56■□□□□ 0.72
SMN2-202ENST00000380742 ARFGAP1Q8N6T3 406 aa19.56■□□□□ 0.72
SMN2-202ENST00000380742 TTC16Q8NEE8 873 aa19.56■□□□□ 0.72
SMN2-202ENST00000380742 PLD4Q96BZ4 506 aa19.56■□□□□ 0.72
SMN2-202ENST00000380742 RPP25Q9BUL9 199 aaKnown RBP19.56■□□□□ 0.72
SMN2-202ENST00000380742 PLA2G2FQ9BZM2 168 aa19.56■□□□□ 0.72
SMN2-202ENST00000380742 KIF9Q9HAQ2 790 aa19.56■□□□□ 0.72
SMN2-202ENST00000380742 ZFP14Q9HCL3 533 aa19.56■□□□□ 0.72
SMN2-202ENST00000380742 CFAP97Q9P2B7 532 aa19.56■□□□□ 0.72
SMN2-202ENST00000380742 IP6K2Q9UHH9 426 aa19.56■□□□□ 0.72
SMN2-202ENST00000380742 HEPACAM2A8MVW5 462 aa19.55■□□□□ 0.72
SMN2-202ENST00000380742 ANHXE9PGG2 379 aa19.55■□□□□ 0.72
SMN2-202ENST00000380742 BUB1O43683 1085 aa19.55■□□□□ 0.72
SMN2-202ENST00000380742 F9P00740 461 aa19.55■□□□□ 0.72
SMN2-202ENST00000380742 KLKB1P03952 638 aa19.55■□□□□ 0.72
SMN2-202ENST00000380742 RDXP35241 583 aaKnown RBP19.55■□□□□ 0.72
SMN2-202ENST00000380742 KPNA1P52294 538 aaPredicted RBP19.55■□□□□ 0.72
SMN2-202ENST00000380742 RING1Q06587 406 aa19.55■□□□□ 0.72
SMN2-202ENST00000380742 HTR4Q13639 388 aa19.55■□□□□ 0.72
SMN2-202ENST00000380742 DAB2IPQ5VWQ8 1189 aa19.55■□□□□ 0.72
SMN2-202ENST00000380742 VITQ6UXI7 678 aa19.55■□□□□ 0.72
SMN2-202ENST00000380742 DDX42Q86XP3 938 aaKnown RBP eCLIP19.55■□□□□ 0.72
SMN2-202ENST00000380742 CPNE8Q86YQ8 564 aa19.55■□□□□ 0.72
SMN2-202ENST00000380742 PLCD3Q8N3E9 789 aa19.55■□□□□ 0.72
SMN2-202ENST00000380742 NIPA2Q8N8Q9 360 aa19.55■□□□□ 0.72
SMN2-202ENST00000380742 ELSPBP1Q96BH3 223 aa19.55■□□□□ 0.72
SMN2-202ENST00000380742 KXD1Q9BQD3 176 aa19.55■□□□□ 0.72
SMN2-202ENST00000380742 OBP2AQ9NY56 170 aa19.55■□□□□ 0.72
SMN2-202ENST00000380742 LOC730098B7Z3J9 87 aa19.54■□□□□ 0.72
SMN2-202ENST00000380742 SCAMP3O14828 347 aaKnown RBP19.54■□□□□ 0.72
SMN2-202ENST00000380742 ECI2O75521 394 aa19.54■□□□□ 0.72
SMN2-202ENST00000380742 BMP1P13497 986 aa19.54■□□□□ 0.72
SMN2-202ENST00000380742 PIGHQ14442 188 aaPredicted RBP19.54■□□□□ 0.72
SMN2-202ENST00000380742 MESDQ14696 234 aa19.54■□□□□ 0.72
SMN2-202ENST00000380742 ZNF662Q6ZS27 426 aa19.54■□□□□ 0.72
SMN2-202ENST00000380742 MTSS1LQ765P7 747 aa19.54■□□□□ 0.72
SMN2-202ENST00000380742 FAM131BQ86XD5 332 aa19.54■□□□□ 0.72
SMN2-202ENST00000380742 ADHFE1Q8IWW8 467 aa19.54■□□□□ 0.72
SMN2-202ENST00000380742 ASB2Q96Q27 587 aa19.54■□□□□ 0.72
SMN2-202ENST00000380742 ANLNQ9NQW6 1124 aa19.54■□□□□ 0.72
SMN2-202ENST00000380742 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.54■□□□□ 0.72
SMN2-202ENST00000380742 LIMD1Q9UGP4 676 aa19.54■□□□□ 0.72
SMN2-202ENST00000380742 SH3BP1Q9Y3L3 701 aa19.54■□□□□ 0.72
SMN2-202ENST00000380742 PAXBP1Q9Y5B6 917 aa19.54■□□□□ 0.72
SMN2-202ENST00000380742 NUMBLQ9Y6R0 609 aa19.54■□□□□ 0.72
SMN2-202ENST00000380742 MYOFQ9NZM1 2061 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 MACROD2A1Z1Q3 448 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 TMEM110-MUSTN1A8MSY1 372 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 KCNU1A8MYU2 1149 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 I6L893 689 aaPredicted RBP19.53■□□□□ 0.72
SMN2-202ENST00000380742 BUB1BO60566 1050 aaPredicted RBP19.53■□□□□ 0.72
SMN2-202ENST00000380742 LRCH4O75427 683 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 PROSCO94903 275 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 CORO1AP31146 461 aaKnown RBP19.53■□□□□ 0.72
SMN2-202ENST00000380742 CCR1P32246 355 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 ZP2Q05996 745 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 PPP2R5DQ14738 602 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 ACAP1Q15027 740 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 HTR3DQ70Z44 454 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 SND1Q7KZF4 910 aaKnown RBP eCLIP19.53■□□□□ 0.72
SMN2-202ENST00000380742 REXO1L1PQ8IX06 675 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 TPCN2Q8NHX9 752 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 BPIFB1Q8TDL5 484 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 RSAD2Q8WXG1 361 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 RNF34Q969K3 372 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 E2F7Q96AV8 911 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 TSGA10Q9BZW7 698 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 WDCPQ9H6R7 721 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 LZTFL1Q9NQ48 299 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 PRKAG3Q9UGI9 489 aa19.53■□□□□ 0.72
SMN2-202ENST00000380742 E2F8A0AVK6 867 aa19.52■□□□□ 0.72
SMN2-202ENST00000380742 KRT86O43790 486 aa19.52■□□□□ 0.72
SMN2-202ENST00000380742 RNF8O76064 485 aa19.52■□□□□ 0.72
SMN2-202ENST00000380742 MOCS3O95396 460 aa19.52■□□□□ 0.72
SMN2-202ENST00000380742 TCF4P15884 667 aa19.52■□□□□ 0.72
SMN2-202ENST00000380742 DESP17661 470 aa19.52■□□□□ 0.72
SMN2-202ENST00000380742 HARS2P49590 506 aaKnown RBP19.52■□□□□ 0.72
SMN2-202ENST00000380742 NUGGCQ68CJ6 796 aa19.52■□□□□ 0.72
SMN2-202ENST00000380742 Q6ZNB5 142 aa19.52■□□□□ 0.72
SMN2-202ENST00000380742 DENND1CQ8IV53 801 aa19.52■□□□□ 0.72
SMN2-202ENST00000380742 MFSD6LQ8IWD5 586 aa19.52■□□□□ 0.72
SMN2-202ENST00000380742 UNC45BQ8IWX7 931 aa19.52■□□□□ 0.72
SMN2-202ENST00000380742 CCDC185Q8N715 623 aa19.52■□□□□ 0.72
SMN2-202ENST00000380742 TKTL2Q9H0I9 626 aa19.52■□□□□ 0.72
SMN2-202ENST00000380742 GOLPH3Q9H4A6 298 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms