RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 WDR60Q8WVS4 1066 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 CNPY3Q9BT09 278 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 PORCNQ9H237 461 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 EEF2KO00418 725 aaKnown RBP11.73□□□□□ -0.53
SMAD9-202ENST00000379826 FKBP6O75344 327 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 IL18RAPO95256 599 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 NDST1P52848 882 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 ESRRGP62508 458 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 RBP5P82980 135 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 IER5Q5VY09 327 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 TLDC1Q6P9B6 456 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 FAM183BPQ6ZVS7 135 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 COLGALT1Q8NBJ5 622 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 ZNF398Q8TD17 642 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 ERVK-10P10266 1014 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 PTPN20Q4JDL3 420 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 LRRC38Q5VT99 294 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 STRA8Q7Z7C7 330 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 ELMO2Q96JJ3 720 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 ZNF333Q96JL9 665 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 ZNF395Q9H8N7 513 aaPredicted RBP11.73□□□□□ -0.53
SMAD9-202ENST00000379826 TJP2Q9UDY2 1190 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 MID2Q9UJV3 735 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 FNDC3AQ9Y2H6 1198 aaKnown RBP11.73□□□□□ -0.53
SMAD9-202ENST00000379826 SDR42E2A6NKP2 422 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 VTNP04004 478 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 PGK2P07205 417 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 PDK2Q15119 407 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 CLEC4DQ8WXI8 215 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 IARS2Q9NSE4 1012 aaKnown RBP11.72□□□□□ -0.53
SMAD9-202ENST00000379826 PNPOQ9NVS9 261 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 MAP3K20Q9NYL2 800 aaKnown RBP11.72□□□□□ -0.53
SMAD9-202ENST00000379826 ZNF711Q9Y462 761 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 RIPK3Q9Y572 518 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 CDY2AQ9Y6F7 541 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 CDY1Q9Y6F8 540 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 IRS2Q9Y4H2 1338 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 ADM5C9JUS6 153 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 LINGO3P0C6S8 592 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 MMP8P22894 467 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 XRRA1Q6P2D8 792 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 ZSCAN18Q8TBC5 510 aaPredicted RBP11.72□□□□□ -0.53
SMAD9-202ENST00000379826 PRR11Q96HE9 360 aaPredicted RBP11.72□□□□□ -0.53
SMAD9-202ENST00000379826 SYT11Q9BT88 431 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 EFHD1Q9BUP0 239 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 UBP1Q9NZI7 540 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 AP4E1Q9UPM8 1137 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 LACTBL1A8MY62 500 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 SUPT3HO75486 399 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 TXNP10599 105 aaKnown RBP11.72□□□□□ -0.53
SMAD9-202ENST00000379826 CPA3P15088 417 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 PKNOX1P55347 436 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 CAPSQ13938 189 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 BOLA3Q53S33 107 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 CWF19L1Q69YN2 538 aaKnown RBP11.72□□□□□ -0.53
SMAD9-202ENST00000379826 NECAB2Q7Z6G3 386 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 FAM131BQ86XD5 332 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 DTNBP1Q96EV8 351 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 CAMKK2Q96RR4 588 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 ASCC2Q9H1I8 757 aaPredicted RBP11.72□□□□□ -0.53
SMAD9-202ENST00000379826 SEMA6AQ9H2E6 1030 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 DDX60LQ5H9U9 1706 aaKnown RBP11.72□□□□□ -0.53
SMAD9-202ENST00000379826 CHADO15335 359 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 TMEM63AO94886 807 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 VDRP11473 427 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 TGM2P21980 687 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 PTP4A2Q12974 167 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 PPP1R15BQ5SWA1 713 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 DPY19L2P1Q6NXN4 242 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 TDRPQ86YL5 185 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 B4GALNT2Q8NHY0 566 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 TFAP2BQ92481 460 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 PCDHA11Q9Y5I1 949 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 KIAA1551Q9HCM1 1747 aa11.72□□□□□ -0.53
SMAD9-202ENST00000379826 PHLPP1O60346 1717 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 ARHGAP10A1A4S6 786 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 AKAP10O43572 662 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 NFICP08651 508 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 SPRP35270 261 aaPredicted RBP11.71□□□□□ -0.53
SMAD9-202ENST00000379826 MSX2P35548 267 aaPredicted RBP11.71□□□□□ -0.53
SMAD9-202ENST00000379826 NBPF12Q5TAG4 269 aaPredicted RBP11.71□□□□□ -0.53
SMAD9-202ENST00000379826 VWA5B1Q5TIE3 1220 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 ARHGAP22Q7Z5H3 698 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 BEST2Q8NFU1 509 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 DCAKDQ8WVC6 231 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 C7orf43Q8WVR3 580 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 OPTNQ96CV9 577 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 FAXDC2Q96IV6 333 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 HIC2Q96JB3 615 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 TRAPPC9Q96Q05 1148 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 FSD1LQ9BXM9 530 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 SIK2Q9H0K1 926 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 COPS7BQ9H9Q2 264 aaPredicted RBP11.71□□□□□ -0.53
SMAD9-202ENST00000379826 HNRNPCP07910 306 aaKnown RBP eCLIP11.71□□□□□ -0.53
SMAD9-202ENST00000379826 PTGER2P43116 358 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 NOVP48745 357 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 TPI1P60174 286 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 IL1RL1Q01638 556 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 OGDHQ02218 1023 aa11.71□□□□□ -0.53
SMAD9-202ENST00000379826 SH3PXD2AQ5TCZ1 1133 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms