RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 MICAL1Q8TDZ2 1067 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 PCED1BQ96HM7 432 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 SYT15Q9BQS2 421 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 ETNK1Q9HBU6 452 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 CHST12Q9NRB3 414 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 PSMC3IPQ9P2W1 217 aaPredicted RBP15.39■□□□□ 0.05
PRNP-201ENST00000379440 SLC24A2Q9UI40 661 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 PADI3Q9ULW8 664 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 FAM47DPA6NHR8 397 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 SMAPO00193 183 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 CHADO15335 359 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 POMCP01189 267 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 FAM200BP0CF97 657 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 WDR4P57081 412 aaKnown RBP15.39■□□□□ 0.05
PRNP-201ENST00000379440 NME3Q13232 169 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 NCBP2-AS2Q69YL0 99 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 KCNT2Q6UVM3 1135 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 ARHGEF18Q6ZSZ5 1173 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 GPRIN1Q7Z2K8 1008 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 DRAXINQ8NBI3 349 aaPredicted RBP15.39■□□□□ 0.05
PRNP-201ENST00000379440 KCTD13Q8WZ19 329 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 PAFAH2Q99487 392 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 SMOQ99835 787 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 ACSS3Q9H6R3 686 aa15.39■□□□□ 0.05
PRNP-201ENST00000379440 EME2A4GXA9 379 aaPredicted RBP15.38■□□□□ 0.05
PRNP-201ENST00000379440 CFAP69A5D8W1 941 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 KBTBD13C9JR72 458 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 M0QYT0 321 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 GPR182O15218 404 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 DAB1O75553 588 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 METTL18O95568 372 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 APRTP07741 180 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 NR1H3Q13133 447 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 TIGD5Q53EQ6 642 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 NUGGCQ68CJ6 796 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 HACE1Q8IYU2 909 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 ADAM32Q8TC27 787 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 RHOBTB2Q9BYZ6 727 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 ULBP1Q9BZM6 244 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 DTLQ9NZJ0 730 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 USP3Q9Y6I4 520 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 TEX264Q9Y6I9 313 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 ZNF487B1APH4 448 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 FAM163BP0C2L3 166 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 ELNP15502 786 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 NOS2P35228 1153 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 CCDC121Q6ZUS5 278 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 ZMIZ2Q8NF64 920 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 NPY6RQ99463 290 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 SAMD15Q9P1V8 674 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 GIT1Q9Y2X7 761 aa15.38■□□□□ 0.05
PRNP-201ENST00000379440 HTTP42858 3142 aa15.37■□□□□ 0.05
PRNP-201ENST00000379440 YJEFN3A6XGL0 299 aa15.37■□□□□ 0.05
PRNP-201ENST00000379440 E7ENQ6 273 aa15.37■□□□□ 0.05
PRNP-201ENST00000379440 FYNP06241 537 aa15.37■□□□□ 0.05
PRNP-201ENST00000379440 FOXN2P32314 431 aa15.37■□□□□ 0.05
PRNP-201ENST00000379440 RPA3P35244 121 aaPredicted RBP15.37■□□□□ 0.05
PRNP-201ENST00000379440 LHX1P48742 406 aa15.37■□□□□ 0.05
PRNP-201ENST00000379440 YWHAGP61981 247 aaKnown RBP eCLIP15.37■□□□□ 0.05
PRNP-201ENST00000379440 UPP1Q16831 310 aa15.37■□□□□ 0.05
PRNP-201ENST00000379440 SLC45A4Q5BKX6 768 aa15.37■□□□□ 0.05
PRNP-201ENST00000379440 FAM35AQ86V20 835 aa15.37■□□□□ 0.05
PRNP-201ENST00000379440 CDKL3Q8IVW4 592 aaPredicted RBP15.37■□□□□ 0.05
PRNP-201ENST00000379440 HASPINQ8TF76 798 aa15.37■□□□□ 0.05
PRNP-201ENST00000379440 NT5C3BQ969T7 300 aa15.37■□□□□ 0.05
PRNP-201ENST00000379440 TGS1Q96RS0 853 aaKnown RBP15.37■□□□□ 0.05
PRNP-201ENST00000379440 SMC6Q96SB8 1091 aa15.37■□□□□ 0.05
PRNP-201ENST00000379440 PIGVQ9NUD9 493 aa15.37■□□□□ 0.05
PRNP-201ENST00000379440 F5H423 210 aaPredicted RBP15.37■□□□□ 0.05
PRNP-201ENST00000379440 ZFXP17010 805 aaPredicted RBP15.37■□□□□ 0.05
PRNP-201ENST00000379440 ARL4AP40617 200 aa15.37■□□□□ 0.05
PRNP-201ENST00000379440 ADGRD1Q6QNK2 874 aa15.37■□□□□ 0.05
PRNP-201ENST00000379440 CAND1Q86VP6 1230 aaKnown RBP15.37■□□□□ 0.05
PRNP-201ENST00000379440 LGMNQ99538 433 aa15.37■□□□□ 0.05
PRNP-201ENST00000379440 KLC2Q9H0B6 622 aa15.37■□□□□ 0.05
PRNP-201ENST00000379440 GOLGA6L7A0A1B0GV03 622 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 TCRBV9S1A1TA0A576 114 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 CREB3O43889 395 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 USP17L7P0C7H9 530 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 KRT4P19013 534 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 BRCC3P46736 316 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 PPP1R21Q6ZMI0 780 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 MRPL10Q7Z7H8 261 aaKnown RBP15.36■□□□□ 0.05
PRNP-201ENST00000379440 TMEM86AQ8N2M4 240 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 DENND1AQ8TEH3 1009 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 DCAKDQ8WVC6 231 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 CFAP36Q96G28 342 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 DHRS4Q9BTZ2 278 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 POPDC2Q9HBU9 364 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 ARHGEF4Q9NR80 690 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 TRMT13Q9NUP7 481 aaKnown RBP15.36■□□□□ 0.05
PRNP-201ENST00000379440 SNX3O60493 162 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 VAV1P15498 845 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 MSH2P43246 934 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 NR2C2P49116 596 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 DEUP1Q05D60 604 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 XRCC4Q13426 336 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 KLHL38Q2WGJ6 581 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 KBTBD12Q3ZCT8 623 aa15.36■□□□□ 0.05
PRNP-201ENST00000379440 BNIPLQ7Z465 357 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms