RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 THAP12O43422 761 aa25.75■■□□□ 1.71
TNFRSF4-201ENST00000379236 LETM1O95202 739 aaPredicted RBP25.75■■□□□ 1.71
TNFRSF4-201ENST00000379236 PENKP01210 267 aaPredicted RBP25.75■■□□□ 1.71
TNFRSF4-201ENST00000379236 LTFP02788 710 aa25.75■■□□□ 1.71
TNFRSF4-201ENST00000379236 GNA15P30679 374 aa25.75■■□□□ 1.71
TNFRSF4-201ENST00000379236 TRIP4Q15650 581 aaPredicted RBP25.75■■□□□ 1.71
TNFRSF4-201ENST00000379236 ARHGAP44Q17R89 818 aa25.75■■□□□ 1.71
TNFRSF4-201ENST00000379236 EXOC3L4Q17RC7 722 aa25.75■■□□□ 1.71
TNFRSF4-201ENST00000379236 FYB2Q5VWT5 728 aa25.75■■□□□ 1.71
TNFRSF4-201ENST00000379236 UCMAQ8WVF2 138 aa25.75■■□□□ 1.71
TNFRSF4-201ENST00000379236 THAP9Q9H5L6 903 aa25.75■■□□□ 1.71
TNFRSF4-201ENST00000379236 VPS45Q9NRW7 570 aa25.75■■□□□ 1.71
TNFRSF4-201ENST00000379236 PRRT4C9JH25 899 aa25.74■■□□□ 1.71
TNFRSF4-201ENST00000379236 CISD3P0C7P0 127 aa25.74■■□□□ 1.71
TNFRSF4-201ENST00000379236 ZNF806P0C7X5 589 aa25.74■■□□□ 1.71
TNFRSF4-201ENST00000379236 CHRM1P11229 460 aaPredicted RBP25.74■■□□□ 1.71
TNFRSF4-201ENST00000379236 ACADSBP45954 432 aa25.74■■□□□ 1.71
TNFRSF4-201ENST00000379236 ZNF445P59923 1031 aa25.74■■□□□ 1.71
TNFRSF4-201ENST00000379236 E2F5Q15329 346 aa25.74■■□□□ 1.71
TNFRSF4-201ENST00000379236 MPPE1Q53F39 396 aa25.74■■□□□ 1.71
TNFRSF4-201ENST00000379236 PMS2CLQ68D20 193 aa25.74■■□□□ 1.71
TNFRSF4-201ENST00000379236 APEX2Q9UBZ4 518 aa25.74■■□□□ 1.71
TNFRSF4-201ENST00000379236 CNTN6Q9UQ52 1028 aa25.74■■□□□ 1.71
TNFRSF4-201ENST00000379236 GTPBP10A4D1E9 387 aaKnown RBP25.73■■□□□ 1.71
TNFRSF4-201ENST00000379236 SART1O43290 800 aaKnown RBP25.73■■□□□ 1.71
TNFRSF4-201ENST00000379236 MSI1O43347 362 aaKnown RBP25.73■■□□□ 1.71
TNFRSF4-201ENST00000379236 SLC9A1P19634 815 aa25.73■■□□□ 1.71
TNFRSF4-201ENST00000379236 DHPSP49366 369 aaPredicted RBP25.73■■□□□ 1.71
TNFRSF4-201ENST00000379236 ATXN1P54253 815 aaKnown RBP25.73■■□□□ 1.71
TNFRSF4-201ENST00000379236 SF3A2Q15428 464 aaKnown RBP25.73■■□□□ 1.71
TNFRSF4-201ENST00000379236 ANKS1BQ7Z6G8 1248 aa25.73■■□□□ 1.71
TNFRSF4-201ENST00000379236 CLEC4CQ8WTT0 213 aa25.73■■□□□ 1.71
TNFRSF4-201ENST00000379236 RLN3Q8WXF3 142 aa25.73■■□□□ 1.71
TNFRSF4-201ENST00000379236 FAM149B1Q96BN6 582 aa25.73■■□□□ 1.71
TNFRSF4-201ENST00000379236 FBXO10Q9UK96 956 aa25.73■■□□□ 1.71
TNFRSF4-201ENST00000379236 SLC27A6Q9Y2P4 619 aa25.73■■□□□ 1.71
TNFRSF4-201ENST00000379236 TSPAN3O60637 253 aa25.72■■□□□ 1.71
TNFRSF4-201ENST00000379236 LATS1O95835 1130 aa25.72■■□□□ 1.71
TNFRSF4-201ENST00000379236 NCAM1P13591 858 aa25.72■■□□□ 1.71
TNFRSF4-201ENST00000379236 PRKCSHP14314 528 aaPredicted RBP25.72■■□□□ 1.71
TNFRSF4-201ENST00000379236 BCKDHBP21953 392 aa25.72■■□□□ 1.71
TNFRSF4-201ENST00000379236 P2RY2P41231 377 aa25.72■■□□□ 1.71
TNFRSF4-201ENST00000379236 ARID5AQ03989 594 aa25.72■■□□□ 1.71
TNFRSF4-201ENST00000379236 MAN2A1Q16706 1144 aa25.72■■□□□ 1.71
TNFRSF4-201ENST00000379236 DPCR1Q3MIW9 517 aa25.72■■□□□ 1.71
TNFRSF4-201ENST00000379236 MSANTD2Q6P1R3 559 aa25.72■■□□□ 1.71
TNFRSF4-201ENST00000379236 GJB7Q6PEY0 223 aa25.72■■□□□ 1.71
TNFRSF4-201ENST00000379236 LPCAT2Q7L5N7 544 aa25.72■■□□□ 1.71
TNFRSF4-201ENST00000379236 CYP2U1Q7Z449 544 aa25.72■■□□□ 1.71
TNFRSF4-201ENST00000379236 UNC45BQ8IWX7 931 aa25.72■■□□□ 1.71
TNFRSF4-201ENST00000379236 OLIG1Q8TAK6 271 aa25.72■■□□□ 1.71
TNFRSF4-201ENST00000379236 TRIM62Q9BVG3 475 aa25.72■■□□□ 1.71
TNFRSF4-201ENST00000379236 PES1O00541 588 aaKnown RBP25.71■■□□□ 1.71
TNFRSF4-201ENST00000379236 ERCC5P28715 1186 aaPredicted RBP25.71■■□□□ 1.71
TNFRSF4-201ENST00000379236 GPD2P43304 727 aa25.71■■□□□ 1.71
TNFRSF4-201ENST00000379236 STARD3Q14849 445 aa25.71■■□□□ 1.71
TNFRSF4-201ENST00000379236 MEA1Q16626 185 aa25.71■■□□□ 1.71
TNFRSF4-201ENST00000379236 NUGGCQ68CJ6 796 aa25.71■■□□□ 1.71
TNFRSF4-201ENST00000379236 DENND1BQ6P3S1 775 aa25.71■■□□□ 1.71
TNFRSF4-201ENST00000379236 FAM217AQ8IXS0 508 aa25.71■■□□□ 1.71
TNFRSF4-201ENST00000379236 ZNF606Q8WXB4 792 aa25.71■■□□□ 1.71
TNFRSF4-201ENST00000379236 ERLEC1Q96DZ1 483 aa25.71■■□□□ 1.71
TNFRSF4-201ENST00000379236 GBP4Q96PP9 640 aa25.71■■□□□ 1.71
TNFRSF4-201ENST00000379236 MED15Q96RN5 788 aa25.71■■□□□ 1.71
TNFRSF4-201ENST00000379236 ACOX2Q99424 681 aa25.71■■□□□ 1.71
TNFRSF4-201ENST00000379236 SLC2A11Q9BYW1 496 aa25.71■■□□□ 1.71
TNFRSF4-201ENST00000379236 CACNA2D2Q9NY47 1150 aa25.71■■□□□ 1.71
TNFRSF4-201ENST00000379236 TNRC6BQ9UPQ9 1833 aaKnown RBP25.7■■□□□ 1.71
TNFRSF4-201ENST00000379236 GFRA2O00451 464 aa25.7■■□□□ 1.7
TNFRSF4-201ENST00000379236 CAPN9O14815 690 aa25.7■■□□□ 1.7
TNFRSF4-201ENST00000379236 NPC1O15118 1278 aa25.7■■□□□ 1.7
TNFRSF4-201ENST00000379236 GDF9O60383 454 aa25.7■■□□□ 1.7
TNFRSF4-201ENST00000379236 CAVIN2O95810 425 aa25.7■■□□□ 1.7
TNFRSF4-201ENST00000379236 SLC11A2P49281 568 aa25.7■■□□□ 1.7
TNFRSF4-201ENST00000379236 TBX4P57082 545 aa25.7■■□□□ 1.7
TNFRSF4-201ENST00000379236 ADGRF1Q5T601 910 aa25.7■■□□□ 1.7
TNFRSF4-201ENST00000379236 IL31Q6EBC2 164 aa25.7■■□□□ 1.7
TNFRSF4-201ENST00000379236 IRF2BP1Q8IU81 584 aa25.7■■□□□ 1.7
TNFRSF4-201ENST00000379236 SCUBE3Q8IX30 993 aa25.7■■□□□ 1.7
TNFRSF4-201ENST00000379236 IPO4Q8TEX9 1081 aaKnown RBP25.7■■□□□ 1.7
TNFRSF4-201ENST00000379236 SERPINB11Q96P15 392 aa25.7■■□□□ 1.7
TNFRSF4-201ENST00000379236 CIPCQ9C0C6 399 aa25.7■■□□□ 1.7
TNFRSF4-201ENST00000379236 SMOC1Q9H4F8 434 aa25.7■■□□□ 1.7
TNFRSF4-201ENST00000379236 HCN2Q9UL51 889 aa25.7■■□□□ 1.7
TNFRSF4-201ENST00000379236 DNAH14Q0VDD8 3507 aa25.7■■□□□ 1.7
TNFRSF4-201ENST00000379236 BCLAF3A2AJT9 711 aaKnown RBP25.69■■□□□ 1.7
TNFRSF4-201ENST00000379236 SLC30A4O14863 429 aa25.69■■□□□ 1.7
TNFRSF4-201ENST00000379236 GABBR2O75899 941 aa25.69■■□□□ 1.7
TNFRSF4-201ENST00000379236 GABRG2P18507 467 aa25.69■■□□□ 1.7
TNFRSF4-201ENST00000379236 PON1P27169 355 aa25.69■■□□□ 1.7
TNFRSF4-201ENST00000379236 GEN1Q17RS7 908 aa25.69■■□□□ 1.7
TNFRSF4-201ENST00000379236 PLA2G2CQ5R387 149 aa25.69■■□□□ 1.7
TNFRSF4-201ENST00000379236 TMA16Q96EY4 203 aaKnown RBP25.69■■□□□ 1.7
TNFRSF4-201ENST00000379236 GABRG3Q99928 467 aa25.69■■□□□ 1.7
TNFRSF4-201ENST00000379236 CALCOCO1Q9P1Z2 691 aa25.69■■□□□ 1.7
TNFRSF4-201ENST00000379236 RAD54BQ9Y620 910 aa25.69■■□□□ 1.7
TNFRSF4-201ENST00000379236 A0A1W2PQF6 199 aa25.68■■□□□ 1.7
TNFRSF4-201ENST00000379236 TYW5A2RUC4 315 aaKnown RBP25.68■■□□□ 1.7
TNFRSF4-201ENST00000379236 EIF4HQ15056 248 aaKnown RBP25.68■■□□□ 1.7
TNFRSF4-201ENST00000379236 HSP90AA4PQ58FG1 418 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms