RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 CHKAP35790 457 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 AMPD2Q01433 879 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 SIGLEC14Q08ET2 396 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 NR1H3Q13133 447 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 C1orf228Q6PIY5 440 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 SND1Q7KZF4 910 aaKnown RBP eCLIP12.41□□□□□ -0.421e-10■■■□□ 19.2
PCNA-201ENST00000379143 TAC4Q86UU9 113 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 TMTC1Q8IUR5 882 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 CPA6Q8N4T0 437 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 SPC24Q8NBT2 197 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 ANP32BQ92688 251 aaKnown RBP12.41□□□□□ -0.42
PCNA-201ENST00000379143 NT5C3BQ969T7 300 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 AZIN2Q96A70 460 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 PGAP3Q96FM1 320 aaPredicted RBP12.41□□□□□ -0.42
PCNA-201ENST00000379143 MSANTD3Q96H12 275 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 ZFYVE19Q96K21 471 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 NPY6RQ99463 290 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 FAM204AQ9H8W3 233 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.41□□□□□ -0.42
PCNA-201ENST00000379143 DDIT4Q9NX09 232 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 SLC12A6Q9UHW9 1150 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 FBXL21Q9UKT6 434 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 WNT6Q9Y6F9 365 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 MYO10Q9HD67 2058 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 TCRBV5S1A1TA0A578 114 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 M0QYT0 321 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 MSI1O43347 362 aaKnown RBP12.4□□□□□ -0.42
PCNA-201ENST00000379143 GREM1O60565 184 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 APOEP02649 317 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 HMBSP08397 361 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 PDGFRAP16234 1089 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 FECHP22830 423 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 SDC4P31431 198 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 CCR1P32246 355 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 CYLC1P35663 651 aaPredicted RBP12.4□□□□□ -0.42
PCNA-201ENST00000379143 FLT3P36888 993 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 SLC11A2P49281 568 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 GFPT1Q06210 699 aaPredicted RBP12.4□□□□□ -0.42
PCNA-201ENST00000379143 EIF4EBP2Q13542 120 aaPredicted RBP12.4□□□□□ -0.42
PCNA-201ENST00000379143 RUNX3Q13761 415 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 EML3Q32P44 896 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 ITPRIPL2Q3MIP1 535 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 PPP1R15BQ5SWA1 713 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 C10orf76Q5T2E6 689 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 PLEKHA7Q6IQ23 1121 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 DCUN1D2Q6PH85 259 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 Q6ZNB5 142 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 ADGRG2Q8IZP9 1017 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 ADAM32Q8TC27 787 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 EXOC4Q96A65 974 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 ZNF653Q96CK0 615 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 SLC39A13Q96H72 371 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 SHDQ96IW2 340 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 EBF3Q9H4W6 596 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 C8orf33Q9H7E9 229 aaPredicted RBP12.4□□□□□ -0.42
PCNA-201ENST00000379143 LUC7LQ9NQ29 371 aaKnown RBP12.4□□□□□ -0.42
PCNA-201ENST00000379143 CNOT8Q9UFF9 292 aaKnown RBP12.4□□□□□ -0.42
PCNA-201ENST00000379143 NENFQ9UMX5 172 aa12.4□□□□□ -0.42
PCNA-201ENST00000379143 C2CD4BA6NLJ0 364 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 ADH1CP00326 375 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 KLKB1P03952 638 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 ABCB4P21439 1286 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 GPD1P21695 349 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 RFC1P35251 1148 aaPredicted RBP12.39□□□□□ -0.43
PCNA-201ENST00000379143 PTPN9P43378 593 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 SULT1E1P49888 294 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 PRKCQQ04759 706 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 DEUP1Q05D60 604 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 NME3Q13232 169 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 MAMLD1Q13495 774 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 GSE1Q14687 1217 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 PPP2R5DQ14738 602 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 SLC44A4Q53GD3 710 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 BRMS1LQ5PSV4 323 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 ACBD5Q5T8D3 534 aaPredicted RBP12.39□□□□□ -0.43
PCNA-201ENST00000379143 TRIM68Q6AZZ1 485 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 STRADAQ7RTN6 431 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 PHLDB2Q86SQ0 1253 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 DENND1CQ8IV53 801 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 BBS7Q8IWZ6 715 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 EMC1Q8N766 993 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 ATP6V0D2Q8N8Y2 350 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 RXFP2Q8WXD0 754 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 CTNNBL1Q8WYA6 563 aaPredicted RBP12.39□□□□□ -0.43
PCNA-201ENST00000379143 RNF34Q969K3 372 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 ASIC4Q96FT7 647 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 BTN2A3PQ96KV6 586 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 FCRL2Q96LA5 508 aaPredicted RBP12.39□□□□□ -0.43
PCNA-201ENST00000379143 CFAP57Q96MR6 1250 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 MCEEQ96PE7 176 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 DDX50Q9BQ39 737 aaKnown RBP12.39□□□□□ -0.43
PCNA-201ENST00000379143 IRX2Q9BZI1 471 aaPredicted RBP12.39□□□□□ -0.43
PCNA-201ENST00000379143 THAP2Q9H0W7 228 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 KCNH6Q9H252 994 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 LINC00597Q9H2U6 94 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 ECT2Q9H8V3 914 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 HPS4Q9NQG7 708 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 GTSE1Q9NYZ3 720 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 STOML2Q9UJZ1 356 aa12.39□□□□□ -0.43
PCNA-201ENST00000379143 AGO1Q9UL18 857 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms