RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 MFSD10Q14728 455 aa7.63□□□□□ -1.19
GPCPD1-201ENST00000379019 TMEM198Q66K66 360 aa7.63□□□□□ -1.19
GPCPD1-201ENST00000379019 UGT2A3Q6UWM9 527 aa7.63□□□□□ -1.19
GPCPD1-201ENST00000379019 CES3Q6UWW8 571 aa7.63□□□□□ -1.19
GPCPD1-201ENST00000379019 NAT16Q8N8M0 369 aa7.63□□□□□ -1.19
GPCPD1-201ENST00000379019 ACTL9Q8TC94 416 aa7.63□□□□□ -1.19
GPCPD1-201ENST00000379019 NCSTNQ92542 709 aa7.63□□□□□ -1.19
GPCPD1-201ENST00000379019 TTC17Q96AE7 1141 aa7.63□□□□□ -1.19
GPCPD1-201ENST00000379019 MARK4Q96L34 752 aa7.63□□□□□ -1.19
GPCPD1-201ENST00000379019 PHACTR1Q9C0D0 580 aa7.63□□□□□ -1.19
GPCPD1-201ENST00000379019 ERAP1Q9NZ08 941 aa7.63□□□□□ -1.19
GPCPD1-201ENST00000379019 ZFP69BQ9UJL9 534 aa7.63□□□□□ -1.19
GPCPD1-201ENST00000379019 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.63□□□□□ -1.19
GPCPD1-201ENST00000379019 CDH16O75309 829 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 GRAP2O75791 330 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 SLC34A2O95436 690 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 WEE2P0C1S8 567 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 PCK1P35558 622 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 ELK3P41970 407 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 BTKQ06187 659 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 MTMR1Q13613 665 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 CCNG2Q16589 344 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 TRIM60Q495X7 471 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 ULK2Q8IYT8 1036 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 ALLCQ8N6M5 410 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 BTBD10Q9BSF8 475 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 SLC13A1Q9BZW2 595 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 EPS8L2Q9H6S3 715 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 GTF2IRD1Q9UHL9 959 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 COQ4Q9Y3A0 265 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 ZSCAN9O15535 394 aaPredicted RBP7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 AHCYL1O43865 530 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 MARCH6O60337 910 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 LRCH4O75427 683 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 ANPEPP15144 967 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 RAG1P15918 1043 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 PTPN4P29074 926 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 EFHC2Q5JST6 749 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 RASIP1Q5U651 963 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 RHPN2Q8IUC4 686 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 SYCP3Q8IZU3 236 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.62□□□□□ -1.191e-6■□□□□ 9.4
GPCPD1-201ENST00000379019 FAM71DQ8N9W8 422 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 SPATA33Q96N06 139 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 HAPLN3Q96S86 360 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 GPATCH2LQ9NWQ4 482 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 ATP11BQ9Y2G3 1177 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 RWDD3Q9Y3V2 267 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 NUMBP49757 651 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 MXRA7P84157 204 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 ROR2Q01974 943 aaKnown RBP7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 CCDC15Q0P6D6 951 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 C15orf59Q2T9L4 293 aaPredicted RBP7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 MYLK3Q32MK0 819 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 PPP4R3CPQ6ZMV5 832 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 TRMT10CQ7L0Y3 403 aaKnown RBP7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 MYLK4Q86YV6 388 aaPredicted RBP7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 THTPAQ9BU02 230 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 RHBDL2Q9NX52 303 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 RAB20Q9NX57 234 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 STK39Q9UEW8 545 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 SCN10AQ9Y5Y9 1956 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 LOC100653049A0A140TA62 436 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 C17orf102A2RUQ5 167 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 C7orf72A4D263 438 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 DNALI1O14645 258 aaPredicted RBP7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 KRT34O76011 436 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 PSAPP07602 524 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 EIF2AK2P19525 551 aaKnown RBP7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 UBA1P22314 1058 aaKnown RBP7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 ZNF76P36508 570 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 MXI1P50539 228 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 GTF2BQ00403 316 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 TLE2Q04725 743 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 SPDYCQ5MJ68 293 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 ZNF280DQ6N043 979 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 SLC35B2Q8TB61 432 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 LRCH3Q96II8 777 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 GCNAQ96QF7 691 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 CPXM1Q96SM3 734 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 PNPOQ9NVS9 261 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 ABHD14A-ACY1A0A1B0GW23 586 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 METTL18O95568 372 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 CXCL10P02778 98 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 C4BPAP04003 597 aaKnown RBP7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 ALDOAP04075 364 aaKnown RBP7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 ALDH18A1P54886 795 aaKnown RBP7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 PITX1P78337 314 aaPredicted RBP7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 OCRLQ01968 901 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 PTPN20Q4JDL3 420 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 PRAMEF19Q5SWL8 479 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 RGS9BPQ6ZS82 235 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 DIS3LQ8TF46 1054 aaKnown RBP7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 KLHL32Q96NJ5 620 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 TRAIPQ9BWF2 469 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 AGO4Q9HCK5 861 aaKnown RBP7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 DDX43Q9NXZ2 648 aaKnown RBP7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 SLC9A2Q9UBY0 812 aa7.62□□□□□ -1.19
GPCPD1-201ENST00000379019 TTLL3Q9Y4R7 772 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms