RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 URB1O60287 2271 aaKnown RBP18.68■□□□□ 0.58
PDLIM4-202ENST00000379018 TMEM131Q92545 1883 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 FAM149AA5PLN7 773 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 METTL12A8MUP2 240 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 CUTAO60888 179 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 PPP6R2O75170 966 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 PENKP01210 267 aaPredicted RBP18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 OXTRP30559 389 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 ZACNQ401N2 412 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 IL27RAQ6UWB1 636 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 LAYNQ6UX15 382 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 SERPINA13PQ6UXR4 307 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 SCD5Q86SK9 330 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 TADA2BQ86TJ2 420 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 DENND1CQ8IV53 801 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 CADM4Q8NFZ8 388 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 GOLGA5Q8TBA6 731 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 ZNF396Q96N95 335 aaPredicted RBP18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 HNRNPABQ99729 332 aaKnown RBP18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 NUP58Q9BVL2 599 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 MMRN2Q9H8L6 949 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 MAGEF1Q9HAY2 307 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 FBXO10Q9UK96 956 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 BTBD3Q9Y2F9 522 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 SLC27A6Q9Y2P4 619 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 CABIN1Q9Y6J0 2220 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 CKAP5Q14008 2032 aa18.67■□□□□ 0.58
PDLIM4-202ENST00000379018 CYBBP04839 570 aa18.66■□□□□ 0.58
PDLIM4-202ENST00000379018 RPN1P04843 607 aaKnown RBP18.66■□□□□ 0.58
PDLIM4-202ENST00000379018 CHKAP35790 457 aa18.66■□□□□ 0.58
PDLIM4-202ENST00000379018 COPAP53621 1224 aa18.66■□□□□ 0.58
PDLIM4-202ENST00000379018 CYP4F3Q08477 520 aa18.66■□□□□ 0.58
PDLIM4-202ENST00000379018 ZNF394Q53GI3 561 aa18.66■□□□□ 0.58
PDLIM4-202ENST00000379018 KLHDC10Q6PID8 442 aa18.66■□□□□ 0.58
PDLIM4-202ENST00000379018 SV2AQ7L0J3 742 aa18.66■□□□□ 0.58
PDLIM4-202ENST00000379018 RSRC2Q7L4I2 434 aaKnown RBP18.66■□□□□ 0.58
PDLIM4-202ENST00000379018 GLRX5Q86SX6 157 aa18.66■□□□□ 0.58
PDLIM4-202ENST00000379018 METTL3Q86U44 580 aaKnown RBP18.66■□□□□ 0.58
PDLIM4-202ENST00000379018 ZNF366Q8N895 744 aa18.66■□□□□ 0.58
PDLIM4-202ENST00000379018 DDI1Q8WTU0 396 aa18.66■□□□□ 0.58
PDLIM4-202ENST00000379018 NT5C1AQ9BXI3 368 aa18.66■□□□□ 0.58
PDLIM4-202ENST00000379018 C6orf106Q9H6K1 298 aaPredicted RBP18.66■□□□□ 0.58
PDLIM4-202ENST00000379018 EXOC1Q9NV70 894 aa18.66■□□□□ 0.58
PDLIM4-202ENST00000379018 ELOVL2Q9NXB9 296 aa18.66■□□□□ 0.58
PDLIM4-202ENST00000379018 AGO1Q9UL18 857 aaKnown RBP18.66■□□□□ 0.58
PDLIM4-202ENST00000379018 ZNF510Q9Y2H8 683 aa18.66■□□□□ 0.58
PDLIM4-202ENST00000379018 CELSR3Q9NYQ7 3312 aa18.65■□□□□ 0.58
PDLIM4-202ENST00000379018 SLC12A8A0AV02 714 aa18.65■□□□□ 0.58
PDLIM4-202ENST00000379018 KCNK3O14649 394 aa18.65■□□□□ 0.58
PDLIM4-202ENST00000379018 FLRT2O43155 660 aa18.65■□□□□ 0.58
PDLIM4-202ENST00000379018 ASS1P00966 412 aaKnown RBP18.65■□□□□ 0.58
PDLIM4-202ENST00000379018 NR3C1P04150 777 aa18.65■□□□□ 0.58
PDLIM4-202ENST00000379018 KIF11P52732 1056 aa18.65■□□□□ 0.58
PDLIM4-202ENST00000379018 CLDN10P78369 228 aa18.65■□□□□ 0.58
PDLIM4-202ENST00000379018 KIF19Q2TAC6 998 aa18.65■□□□□ 0.58
PDLIM4-202ENST00000379018 TMPRSS7Q7RTY8 843 aa18.65■□□□□ 0.58
PDLIM4-202ENST00000379018 TAF4BQ92750 862 aa18.65■□□□□ 0.58
PDLIM4-202ENST00000379018 BBC3Q96PG8 261 aaPredicted RBP18.65■□□□□ 0.58
PDLIM4-202ENST00000379018 IMPG2Q9BZV3 1241 aa18.65■□□□□ 0.58
PDLIM4-202ENST00000379018 TOR4AQ9NXH8 423 aa18.65■□□□□ 0.58
PDLIM4-202ENST00000379018 NFE2L3Q9Y4A8 694 aa18.65■□□□□ 0.58
PDLIM4-202ENST00000379018 SNX11Q9Y5W9 270 aa18.65■□□□□ 0.58
PDLIM4-202ENST00000379018 IGSF10Q6WRI0 2623 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 ASXL3Q9C0F0 2248 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 PVALEFA0A1B0GWK0 134 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 NPC1O15118 1278 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 ZIC2O95409 532 aaPredicted RBP18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 ZNF883P0CG24 379 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 TRIM49P0CI25 452 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 TRIM49CP0CI26 452 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 PSEN1P49768 467 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 COG7P83436 770 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 IL9RQ01113 521 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 STK4Q13043 487 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 FNDC3BQ53EP0 1204 aaKnown RBP18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 PPP1R26Q5T8A7 1209 aaPredicted RBP18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 CCDC186Q7Z3E2 898 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 KIAA0895Q8NCT3 520 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 BAHD1Q8TBE0 780 aaPredicted RBP18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 CYB5D2Q8WUJ1 264 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 CRELD1Q96HD1 420 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 PIWIL1Q96J94 861 aaKnown RBP18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 DCBLD2Q96PD2 775 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 CDC6Q99741 560 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 DCLK3Q9C098 648 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 LHX5Q9H2C1 402 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 APOBEC3GQ9HC16 384 aaKnown RBP18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 FAM13BQ9NYF5 915 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 MARCH2Q9P0N8 246 aa18.64■□□□□ 0.57
PDLIM4-202ENST00000379018 TRABD2BA6NFA1 517 aa18.63■□□□□ 0.57
PDLIM4-202ENST00000379018 TSPAN3O60637 253 aa18.63■□□□□ 0.57
PDLIM4-202ENST00000379018 YEATS4O95619 227 aa18.63■□□□□ 0.57
PDLIM4-202ENST00000379018 ACSL1P33121 698 aa18.63■□□□□ 0.57
PDLIM4-202ENST00000379018 GCLMP48507 274 aa18.63■□□□□ 0.57
PDLIM4-202ENST00000379018 AFF3P51826 1226 aaKnown RBP18.63■□□□□ 0.57
PDLIM4-202ENST00000379018 INCA1Q0VD86 236 aa18.63■□□□□ 0.57
PDLIM4-202ENST00000379018 ENPP2Q13822 863 aa18.63■□□□□ 0.57
PDLIM4-202ENST00000379018 SUZ12Q15022 739 aaKnown RBP18.63■□□□□ 0.57
PDLIM4-202ENST00000379018 TMEM215Q68D42 235 aa18.63■□□□□ 0.57
PDLIM4-202ENST00000379018 CEP57L1Q8IYX8 460 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms