RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 SLC47A2Q86VL8 602 aa17.76■□□□□ 0.43
RER1-202ENST00000378512 FMNL3Q8IVF7 1028 aa17.76■□□□□ 0.43
RER1-202ENST00000378512 SCUBE3Q8IX30 993 aa17.76■□□□□ 0.43
RER1-202ENST00000378512 STK33Q9BYT3 514 aa17.76■□□□□ 0.43
RER1-202ENST00000378512 ARRDC1-AS1Q9H2J1 176 aa17.76■□□□□ 0.43
RER1-202ENST00000378512 RXFP3Q9NSD7 469 aa17.76■□□□□ 0.43
RER1-202ENST00000378512 WDR35Q9P2L0 1181 aa17.76■□□□□ 0.43
RER1-202ENST00000378512 DAAM1Q9Y4D1 1078 aa17.76■□□□□ 0.43
RER1-202ENST00000378512 SDK1Q7Z5N4 2213 aa17.76■□□□□ 0.43
RER1-202ENST00000378512 SLC12A8A0AV02 714 aa17.75■□□□□ 0.43
RER1-202ENST00000378512 E5RJQ4 531 aa17.75■□□□□ 0.43
RER1-202ENST00000378512 LATS1O95835 1130 aa17.75■□□□□ 0.43
RER1-202ENST00000378512 PENKP01210 267 aaPredicted RBP17.75■□□□□ 0.43
RER1-202ENST00000378512 CORO1AP31146 461 aaKnown RBP17.75■□□□□ 0.43
RER1-202ENST00000378512 CDH5P33151 784 aaPredicted RBP17.75■□□□□ 0.43
RER1-202ENST00000378512 CHKAP35790 457 aa17.75■□□□□ 0.43
RER1-202ENST00000378512 USP8P40818 1118 aa17.75■□□□□ 0.43
RER1-202ENST00000378512 TNFRSF4P43489 277 aa17.75■□□□□ 0.43
RER1-202ENST00000378512 KIR2DL1P43626 348 aaPredicted RBP17.75■□□□□ 0.43
RER1-202ENST00000378512 COPB1P53618 953 aaKnown RBP17.75■□□□□ 0.43
RER1-202ENST00000378512 BPIFB4P59827 614 aa17.75■□□□□ 0.43
RER1-202ENST00000378512 DMC1Q14565 340 aa17.75■□□□□ 0.43
RER1-202ENST00000378512 CSRP2Q16527 193 aa17.75■□□□□ 0.43
RER1-202ENST00000378512 C2orf27AQ580R0 203 aa17.75■□□□□ 0.43
RER1-202ENST00000378512 CAVIN1Q6NZI2 390 aaKnown RBP17.75■□□□□ 0.43
RER1-202ENST00000378512 CAMKK1Q8N5S9 505 aa17.75■□□□□ 0.43
RER1-202ENST00000378512 RNF139Q8WU17 664 aa17.75■□□□□ 0.43
RER1-202ENST00000378512 DDX1Q92499 740 aaKnown RBP17.75■□□□□ 0.43
RER1-202ENST00000378512 LSM14BQ9BX40 385 aaKnown RBP17.75■□□□□ 0.43
RER1-202ENST00000378512 SFMBT1Q9UHJ3 866 aa17.75■□□□□ 0.43
RER1-202ENST00000378512 INVSQ9Y283 1065 aa17.75■□□□□ 0.43
RER1-202ENST00000378512 SPTBN2O15020 2390 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 LGALS16A8MUM7 142 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 F8VZ95 297 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 LRP3O75074 770 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 APODP05090 189 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 TYRP14679 529 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 MRPS21P82921 87 aaKnown RBP17.74■□□□□ 0.43
RER1-202ENST00000378512 RING1Q06587 406 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 NNTQ13423 1086 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 EIF4EBP2Q13542 120 aaPredicted RBP17.74■□□□□ 0.43
RER1-202ENST00000378512 ANO4Q32M45 955 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 HSF5Q4G112 596 aaPredicted RBP17.74■□□□□ 0.43
RER1-202ENST00000378512 PREPLQ4J6C6 727 aaPredicted RBP17.74■□□□□ 0.43
RER1-202ENST00000378512 ANO6Q4KMQ2 910 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 FYB2Q5VWT5 728 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 TERB1Q8NA31 727 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 KCNV2Q8TDN2 545 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 ACDQ96AP0 544 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 CPXM1Q96SM3 734 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 BBS2Q9BXC9 721 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 MIS12Q9H081 205 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 ZDHHC4Q9NPG8 344 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 ARHGEF4Q9NR80 690 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 ST7Q9NRC1 585 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 DEC1Q9P2X7 70 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 STARD13Q9Y3M8 1113 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 RALGAPA1Q6GYQ0 2036 aa17.74■□□□□ 0.43
RER1-202ENST00000378512 PES1O00541 588 aaKnown RBP17.73■□□□□ 0.43
RER1-202ENST00000378512 CISD3P0C7P0 127 aa17.73■□□□□ 0.43
RER1-202ENST00000378512 HNRNPLP14866 589 aaKnown RBP eCLIP17.73■□□□□ 0.43
RER1-202ENST00000378512 CYP11B1P15538 503 aa17.73■□□□□ 0.43
RER1-202ENST00000378512 JAM2P57087 298 aa17.73■□□□□ 0.43
RER1-202ENST00000378512 TPGS1Q6ZTW0 290 aa17.73■□□□□ 0.43
RER1-202ENST00000378512 CACNA2D4Q7Z3S7 1137 aa17.73■□□□□ 0.43
RER1-202ENST00000378512 DENND1CQ8IV53 801 aa17.73■□□□□ 0.43
RER1-202ENST00000378512 DHX40Q8IX18 779 aaKnown RBP17.73■□□□□ 0.43
RER1-202ENST00000378512 CCDC33Q8N5R6 958 aa17.73■□□□□ 0.43
RER1-202ENST00000378512 NAT16Q8N8M0 369 aa17.73■□□□□ 0.43
RER1-202ENST00000378512 AZIN2Q96A70 460 aa17.73■□□□□ 0.43
RER1-202ENST00000378512 ERGIC2Q96RQ1 377 aa17.73■□□□□ 0.43
RER1-202ENST00000378512 TJP2Q9UDY2 1190 aa17.73■□□□□ 0.43
RER1-202ENST00000378512 HCN2Q9UL51 889 aa17.73■□□□□ 0.43
RER1-202ENST00000378512 SPAG17Q6Q759 2223 aa17.73■□□□□ 0.43
RER1-202ENST00000378512 PLXND1Q9Y4D7 1925 aa17.73■□□□□ 0.43
RER1-202ENST00000378512 NEDD8-MDP1E9PL57 170 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 TRIM24O15164 1050 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 EPHB6O15197 1021 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 MSI1O43347 362 aaKnown RBP17.72■□□□□ 0.43
RER1-202ENST00000378512 IGLV3-25P01717 112 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 TPM2P07951 284 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 GLI1P08151 1106 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 HMBSP08397 361 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 KLK7P49862 253 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 RAPGEF1Q13905 1077 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 FKBP15Q5T1M5 1219 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 RNF43Q68DV7 783 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 AOPEPQ8N6M6 819 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 IL17RCQ8NAC3 791 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 DQX1Q8TE96 717 aaKnown RBP17.72■□□□□ 0.43
RER1-202ENST00000378512 SLC39A13Q96H72 371 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 PIWIL1Q96J94 861 aaKnown RBP17.72■□□□□ 0.43
RER1-202ENST00000378512 PPP1R13BQ96KQ4 1090 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 XPO6Q96QU8 1125 aaKnown RBP17.72■□□□□ 0.43
RER1-202ENST00000378512 RTKNQ9BST9 563 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 TRIM62Q9BVG3 475 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 IRX2Q9BZI1 471 aaPredicted RBP17.72■□□□□ 0.43
RER1-202ENST00000378512 TPSD1Q9BZJ3 242 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 NAT10Q9H0A0 1025 aaKnown RBP17.72■□□□□ 0.43
RER1-202ENST00000378512 ASNSD1Q9NWL6 643 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms