RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 F7P08709 466 aaPredicted RBP16.37■□□□□ 0.21
CKAP4-201ENST00000378026 PRKG1Q13976 671 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 NRF1Q16656 503 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 PPM1JQ5JR12 505 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 RARS2Q5T160 578 aaKnown RBP16.37■□□□□ 0.21
CKAP4-201ENST00000378026 NTPCRQ9BSD7 190 aaKnown RBP16.37■□□□□ 0.21
CKAP4-201ENST00000378026 ZNF358Q9NW07 568 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 PCDHGA4Q9Y5G9 962 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 CLRN2A0PK11 232 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 DENRO43583 198 aaKnown RBP16.37■□□□□ 0.21
CKAP4-201ENST00000378026 FAM58BPP0C7Q3 252 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 FUT4P22083 530 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 MTTPP55157 894 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 PPM1LQ5SGD2 360 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 ZBTB33Q86T24 672 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 RIN3Q8TB24 985 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 ADAM32Q8TC27 787 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 LENG8Q96PV6 779 aaPredicted RBP16.37■□□□□ 0.21
CKAP4-201ENST00000378026 MTMR12Q9C0I1 747 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 RAVER2Q9HCJ3 691 aaKnown RBP16.37■□□□□ 0.21
CKAP4-201ENST00000378026 NXF1Q9UBU9 619 aaKnown RBP16.37■□□□□ 0.21
CKAP4-201ENST00000378026 FBXO40Q9UH90 709 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 ZNF180Q9UJW8 692 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 USP18Q9UMW8 372 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 NR2E3Q9Y5X4 410 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 NEMP1O14524 444 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 BIRC5O15392 142 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 GRAP2O75791 330 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 GSRP00390 522 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 L1CAMP32004 1257 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 STT3AP46977 705 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 FLOT2Q14254 428 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 BSPRYQ5W0U4 402 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 SCYL2Q6P3W7 929 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 ARCQ7LC44 396 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 ZNF554Q86TJ5 538 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 TRIML2Q8N7C3 387 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 GRIN3AQ8TCU5 1115 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 KCNK16Q96T55 309 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 CDRT15Q96T59 188 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 EMCNQ9ULC0 261 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 TPP1O14773 563 aa16.36■□□□□ 0.21
CKAP4-201ENST00000378026 CHADO15335 359 aa16.36■□□□□ 0.21
CKAP4-201ENST00000378026 PRKCHP24723 683 aa16.36■□□□□ 0.21
CKAP4-201ENST00000378026 TNFSF9P41273 254 aa16.36■□□□□ 0.21
CKAP4-201ENST00000378026 RAP1GAPP47736 663 aa16.36■□□□□ 0.21
CKAP4-201ENST00000378026 MCCD1P59942 119 aaPredicted RBP16.36■□□□□ 0.21
CKAP4-201ENST00000378026 CBX3Q13185 183 aa16.36■□□□□ 0.21
CKAP4-201ENST00000378026 PTAR1Q7Z6K3 402 aaPredicted RBP16.36■□□□□ 0.21
CKAP4-201ENST00000378026 ZNF410Q86VK4 478 aa16.36■□□□□ 0.21
CKAP4-201ENST00000378026 ATXN7L3BQ96GX2 97 aa16.36■□□□□ 0.21
CKAP4-201ENST00000378026 ZFRQ96KR1 1074 aaKnown RBP16.36■□□□□ 0.21
CKAP4-201ENST00000378026 SIKE1Q9BRV8 207 aa16.36■□□□□ 0.21
CKAP4-201ENST00000378026 SIPA1L1O43166 1804 aa16.36■□□□□ 0.21
CKAP4-201ENST00000378026 ADCY6O43306 1168 aa16.36■□□□□ 0.21
CKAP4-201ENST00000378026 FBXO21O94952 628 aa16.36■□□□□ 0.21
CKAP4-201ENST00000378026 ZBED1O96006 694 aa16.36■□□□□ 0.21
CKAP4-201ENST00000378026 XRCC1P18887 633 aaPredicted RBP16.36■□□□□ 0.21
CKAP4-201ENST00000378026 DGKZQ13574 1117 aa16.36■□□□□ 0.21
CKAP4-201ENST00000378026 NIPA2Q8N8Q9 360 aa16.36■□□□□ 0.21
CKAP4-201ENST00000378026 PRMT6Q96LA8 375 aaPredicted RBP16.36■□□□□ 0.21
CKAP4-201ENST00000378026 TCHPQ9BT92 498 aa16.36■□□□□ 0.21
CKAP4-201ENST00000378026 PNPLA8Q9NP80 782 aa16.36■□□□□ 0.21
CKAP4-201ENST00000378026 FOXD2O60548 495 aaPredicted RBP16.35■□□□□ 0.21
CKAP4-201ENST00000378026 HSD17B4P51659 736 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 CLDN10P78369 228 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 PLOD1Q02809 727 aaPredicted RBP16.35■□□□□ 0.21
CKAP4-201ENST00000378026 TAP1Q03518 808 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 SLC9B1Q4ZJI4 515 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 WDR78Q5VTH9 848 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 TNS4Q8IZW8 715 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 LILRA2Q8N149 483 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 TMEM130Q8N3G9 435 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 ZNF512Q96ME7 567 aaPredicted RBP16.35■□□□□ 0.21
CKAP4-201ENST00000378026 PEBP4Q96S96 227 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 CPXM1Q96SM3 734 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 SORT1Q99523 831 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 SEMA6AQ9H2E6 1030 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 EFR3BQ9Y2G0 817 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 JAK3P52333 1124 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 THOP1P52888 689 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 NOMO1Q15155 1222 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 FAM156AQ8NDB6 213 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 CCT7Q99832 543 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 PKP2Q99959 881 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 TIMMDC1Q9NPL8 285 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 ANLNQ9NQW6 1124 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 PAK5Q9P286 719 aa16.35■□□□□ 0.21
CKAP4-201ENST00000378026 TTC36A6NLP5 189 aa16.34■□□□□ 0.21
CKAP4-201ENST00000378026 STX16-NPEPL1H3BU86 382 aa16.34■□□□□ 0.21
CKAP4-201ENST00000378026 K7ERI5 159 aa16.34■□□□□ 0.21
CKAP4-201ENST00000378026 AMHP03971 560 aa16.34■□□□□ 0.21
CKAP4-201ENST00000378026 ENO3P13929 434 aaPredicted RBP16.34■□□□□ 0.21
CKAP4-201ENST00000378026 CDH2P19022 906 aaPredicted RBP16.34■□□□□ 0.21
CKAP4-201ENST00000378026 GABRB2P47870 512 aa16.34■□□□□ 0.21
CKAP4-201ENST00000378026 ZNF132P52740 706 aa16.34■□□□□ 0.21
CKAP4-201ENST00000378026 RPS6P62753 249 aaKnown RBP16.34■□□□□ 0.21
CKAP4-201ENST00000378026 KLF10Q13118 480 aa16.34■□□□□ 0.21
CKAP4-201ENST00000378026 PDE1CQ14123 709 aaPredicted RBP16.34■□□□□ 0.21
CKAP4-201ENST00000378026 LPIN1Q14693 890 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms