RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 C8BP07358 591 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 DGKDQ16760 1214 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 IRF6O14896 467 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 DFNA5O60443 496 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 PCNAP12004 261 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 CDR2LQ86X02 465 aaPredicted RBP5.08□□□□□ -1.6
PCDH9-201ENST00000377861 RHPN2Q8IUC4 686 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 EMSYQ7Z589 1322 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 PPEF1O14829 653 aaPredicted RBP5.08□□□□□ -1.6
PCDH9-201ENST00000377861 ITIH1P19827 911 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 PLEKHG6Q3KR16 790 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 SRPRAP08240 638 aaKnown RBP5.08□□□□□ -1.6
PCDH9-201ENST00000377861 EEF1DP29692 281 aaKnown RBP5.08□□□□□ -1.6
PCDH9-201ENST00000377861 PHEXP78562 749 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 MVKQ03426 396 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 ZBTB1Q9Y2K1 713 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 MSH4O15457 936 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 SGTAO43765 313 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 EDF1O60869 148 aaKnown RBP5.08□□□□□ -1.6
PCDH9-201ENST00000377861 APOEP02649 317 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 CD44P16070 742 aaKnown RBP5.08□□□□□ -1.6
PCDH9-201ENST00000377861 DRD4P21917 467 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 CDC25AP30304 524 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 BRMS1LQ5PSV4 323 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 SMYD4Q8IYR2 804 aaPredicted RBP5.08□□□□□ -1.6
PCDH9-201ENST00000377861 REPS1Q96D71 796 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 USE1Q9NZ43 259 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 MKLN1Q9UL63 735 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 L1CAMP32004 1257 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 CLEC4FQ8N1N0 589 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 SLC26A7Q8TE54 656 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 LDLRP01130 860 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 TUBGCP3Q96CW5 907 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 RYDENQ9NUL5 291 aaKnown RBP5.08□□□□□ -1.6
PCDH9-201ENST00000377861 GNGT2O14610 69 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 GSTA4O15217 222 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 ASS1P00966 412 aaKnown RBP5.08□□□□□ -1.6
PCDH9-201ENST00000377861 FAM98BQ52LJ0 330 aaKnown RBP5.08□□□□□ -1.6
PCDH9-201ENST00000377861 LCLAT1Q6UWP7 414 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 LONP2Q86WA8 852 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 BEND7Q8N7W2 519 aaPredicted RBP5.08□□□□□ -1.6
PCDH9-201ENST00000377861 PIM2Q9P1W9 311 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 KRT1P04264 644 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 PTK7Q13308 1070 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 FBXW8Q8N3Y1 598 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 EBNA1BP2Q99848 306 aaKnown RBP5.08□□□□□ -1.6
PCDH9-201ENST00000377861 CRNNQ9UBG3 495 aaPredicted RBP5.08□□□□□ -1.6
PCDH9-201ENST00000377861 Q9Y3F1 56 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 TESMINQ9Y4I5 508 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 CNTNAP1P78357 1384 aa5.08□□□□□ -1.6
PCDH9-201ENST00000377861 KRT75O95678 551 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 NOS2P35228 1153 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 GCLMP48507 274 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 DPYSL3Q14195 570 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ACCSLQ4AC99 568 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ST7Q9NRC1 585 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ATP6V1HQ9UI12 483 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 MYBP10242 640 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 PNLIPRP1P54315 467 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 CDH17Q12864 832 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 GDPGP1Q6ZNW5 385 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 TRABD2AQ86V40 505 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ZC3H7AQ8IWR0 971 aaKnown RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ATP6V1E2Q96A05 226 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 RRM2P31350 389 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 DPY19L1Q2PZI1 675 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 OXNAD1Q96HP4 312 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 SLC45A3Q96JT2 553 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 FAM237BA0A1B0GVD1 139 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 HSD17B2P37059 387 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 TTC33Q6PID6 262 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 PID1Q7Z2X4 250 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 NKX2-3Q8TAU0 364 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ZC3H13Q5T200 1668 aaKnown RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 MAGEB3O15480 346 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 FGF19O95750 216 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 GALNTL6Q49A17 601 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ZC3H18Q86VM9 953 aaKnown RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 TCAIMQ8N3R3 496 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 SH3RF3Q8TEJ3 882 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 RMND5BQ96G75 393 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 RAP2CQ9Y3L5 183 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 CPT1AP50416 773 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 MYL10Q9BUA6 226 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 BLOC1S4Q9NUP1 217 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 BACE1P56817 501 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 TMTC4Q5T4D3 741 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 CENPNQ96H22 339 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 MRPS26Q9BYN8 205 aaKnown RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 SPAG4Q9NPE6 437 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 PNPLA3Q9NST1 481 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ATP11BQ9Y2G3 1177 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 CST8O60676 142 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 SUPT20HL2P0C7V6 817 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 RARRES1P49788 294 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 RCN2Q14257 317 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ARHGAP22Q7Z5H3 698 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ANKRD52Q8NB46 1076 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ZKSCAN4Q969J2 545 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 HPDLQ96IR7 371 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms