RNA–Protein interactions for RNA: ENST00000377823.1

CUBN-201, Transcript of cubilin, humanhuman

TSL 3 BASIC

Gene CUBN, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-201ENST00000377823 VPS45Q9NRW7 570 aa4.56□□□□□ -1.68
CUBN-201ENST00000377823 RRN3Q9NYV6 651 aa4.56□□□□□ -1.68
CUBN-201ENST00000377823 NDUFAF4Q9P032 175 aa4.56□□□□□ -1.68
CUBN-201ENST00000377823 FEM1BQ9UK73 627 aa4.56□□□□□ -1.68
CUBN-201ENST00000377823 PACSIN3Q9UKS6 424 aa4.56□□□□□ -1.68
CUBN-201ENST00000377823 ZBTB1Q9Y2K1 713 aa4.56□□□□□ -1.68
CUBN-201ENST00000377823 LOC105369274A0A096LPK9 316 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 LOC102723532A0A0G2JNH3 316 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 E7EVH7 732 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 M0QYT0 321 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 MGST3O14880 152 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 PRAMEF2O60811 474 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 KRT38O76015 456 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 GCP02774 474 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 SERPINA4P29622 427 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 THBS4P35443 961 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 CDK7P50613 346 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 COPB1P53618 953 aaKnown RBP4.55□□□□□ -1.68
CUBN-201ENST00000377823 CYP4F2P78329 520 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 GPC5P78333 572 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 CBFBQ13951 182 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 TAF12Q16514 161 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 AAK1Q2M2I8 961 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 GALNTL6Q49A17 601 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 TSTD2Q5T7W7 516 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 ACSM6Q6P461 480 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 NAPRTQ6XQN6 538 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 RINLQ6ZS11 566 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 SLC29A4Q7RTT9 530 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 GGNQ86UU5 652 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 C2CD5Q86YS7 1000 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 OR4N4Q8N0Y3 316 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 C12orf76Q8N812 135 aaPredicted RBP4.55□□□□□ -1.68
CUBN-201ENST00000377823 NPIPB3Q92617 1050 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 GOLGA1Q92805 767 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 SDCCAG3Q96C92 435 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 MMS19Q96T76 1030 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 MACROD1Q9BQ69 325 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 PYM1Q9BRP8 204 aaKnown RBP4.55□□□□□ -1.68
CUBN-201ENST00000377823 CIPCQ9C0C6 399 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 KCNK9Q9NPC2 374 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 LIN7CQ9NUP9 197 aaKnown RBP4.55□□□□□ -1.68
CUBN-201ENST00000377823 TFCP2L1Q9NZI6 479 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 KCND3Q9UK17 655 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 VPS4AQ9UN37 437 aa4.55□□□□□ -1.68
CUBN-201ENST00000377823 SLC38A8A6NNN8 435 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 ZNF213O14771 459 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 NKX2-8O15522 239 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 EXOC3O60645 756 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 RAMP2O60895 175 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 RHOBTB3O94955 611 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 TK1P04183 234 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 GALNSP34059 522 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 PAPOLAP51003 745 aaKnown RBP4.54□□□□□ -1.68
CUBN-201ENST00000377823 ACTR2P61160 394 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 RAE1P78406 368 aaKnown RBP4.54□□□□□ -1.68
CUBN-201ENST00000377823 RNASELQ05823 741 aaKnown RBP4.54□□□□□ -1.68
CUBN-201ENST00000377823 FAM187BQ17R55 369 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 ERCC6LQ2NKX8 1250 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 ALFQ53S48 1182 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 C16orf89Q6UX73 402 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 SYT13Q7L8C5 426 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 HERC6Q8IVU3 1022 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 TERB1Q8NA31 727 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 CAGE1Q8TC20 777 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 EDC3Q96F86 508 aaKnown RBP4.54□□□□□ -1.68
CUBN-201ENST00000377823 SNX18Q96RF0 628 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 TWSG1Q9GZX9 223 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 IL17RBQ9NRM6 502 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 C9orf78Q9NZ63 289 aaPredicted RBP4.54□□□□□ -1.68
CUBN-201ENST00000377823 ENTPD2Q9Y5L3 495 aa4.54□□□□□ -1.68
CUBN-201ENST00000377823 LRRFIP2Q9Y608 721 aaKnown RBP4.54□□□□□ -1.68
CUBN-201ENST00000377823 A0A087X1B8 175 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 NCAM2O15394 837 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 C1RP00736 705 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 HNRNPCP07910 306 aaKnown RBP eCLIP4.53□□□□□ -1.68
CUBN-201ENST00000377823 CKMT1AP12532 417 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 APEHP13798 732 aaKnown RBP4.53□□□□□ -1.68
CUBN-201ENST00000377823 RXRAP19793 462 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 MATN1P21941 496 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 DUSP1P28562 367 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 JAK3P52333 1124 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 CACNA2D1P54289 1103 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 FAM3BP58499 235 aaPredicted RBP4.53□□□□□ -1.68
CUBN-201ENST00000377823 RBM6P78332 1123 aaKnown RBP4.53□□□□□ -1.68
CUBN-201ENST00000377823 ZXDAP98168 799 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 CFHR3Q02985 330 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 EFR3AQ14156 821 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 SMAD1Q15797 465 aaKnown RBP4.53□□□□□ -1.68
CUBN-201ENST00000377823 TBRG1Q3YBR2 411 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 AKNAD1Q5T1N1 836 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 DGAT2L7PQ6IED9 249 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 CEP85Q6P2H3 762 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 MRGPRGQ86SM5 289 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 LDLRAD3Q86YD5 345 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 LINC01465Q8N7H1 131 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 AMER2Q8N7J2 671 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 OR52L2PQ8NGH6 319 aa4.53□□□□□ -1.68
CUBN-201ENST00000377823 MAFAQ8NHW3 353 aaPredicted RBP4.53□□□□□ -1.68
CUBN-201ENST00000377823 GLMPQ8WWB7 406 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms